C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: surfeit gene 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000015017 Surf2-001 ENSMUSG00000014873 10090 + 2:26916367-26920183 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainLiverENSMUST00000015017
Transcript ID Brain Liver
ENSMUST00000015017 30.249±0.00 36.100±2.24

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006DK CIL_0006DK_0002 CGP 2:26910764-26916530
CIL_0006DJ CIL_0006DJ_0002 CGP 2:26913383-26920183
CIL_0006DE CIL_0006DE_0002 CGP 2:26916367-26933928

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005634 IEA nucleus
GO:0005730 IEA nucleolus
GO:0005886 IEA plasma membrane
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000371964 SURF2-001 protein_coding Homo_sapiens 0 346
ENST00000371989 SURF4-001 protein_coding Homo_sapiens 5e-40 171
ENST00000486887 SURF2-003 processed_transcript Homo_sapiens 5.60519e-45 183
ENST00000495524 SURF2-002 processed_transcript Homo_sapiens 0 191
ENST00000545297 SURF4-201 protein_coding Homo_sapiens 2e-39 169
ENST00000613129 SURF4-202 protein_coding Homo_sapiens 2e-39 169
ENST00000618229 SURF4-203 protein_coding Homo_sapiens 2e-39 169

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