C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: PDZ domain containing 11
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000015668 Pdzd11 10090 - X:100622883-100626568 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000015812 Pdzd11-003 100622886-100626568 protein_coding
  ENSMUST00000059099 Pdzd11-001 100622908-100625935 protein_coding
  ENSMUST00000144643 Pdzd11-002 100622883-100625938 retained_intron
  ENSMUST00000151548 Pdzd11-004 100623377-100626271 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000015812ENSMUST00000059099ENSMUST00000144643ENSMUST00000151548
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000015812 2.612±0.00 N/A N/A N/A N/A N/A 1.854±0.77 7.602±0.00 2.212±0.00 N/A 0.729±0.10 N/A 5.595±0.00 1.175±0.00
ENSMUST00000059099 11.716±2.79 2.815±0.48 15.862±2.24 17.226±1.67 4.599±1.01 5.058±0.81 5.988±1.08 9.560±1.42 12.249±10.09 7.515±0.68 5.138±1.09 9.388±9.04 33.619±8.41 2.268±0.49
ENSMUST00000144643 N/A N/A N/A N/A N/A N/A N/A N/A 0.960±0.00 N/A 0.634±0.00 3.302±0.00 N/A N/A
ENSMUST00000151548 N/A N/A N/A N/A 4.958±3.34 N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002PK CIL_0002PK_0002 CGP X:100622883-100727214

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005829 ISS cytosol
GO:0008022 ISS protein C-terminus binding
GO:0008150 ND biological_process
GO:0016323 ISS basolateral plasma membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000053194 pdzd11 PDZ domain containing 11 protein_coding Danio_rerio
ENSG00000120509 PDZD11 PDZ domain containing 11 protein_coding Homo_sapiens

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