C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: PDZ domain containing 11
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000015812 Pdzd11-003 ENSMUSG00000015668 10090 - X:100622886-100626568 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeHeartKidneyLiverMusclePlacentaTestisENSMUST00000015812
Transcript ID Adipose Heart Kidney Liver Muscle Placenta Testis
ENSMUST00000015812 2.612±0.00 1.854±0.77 7.602±0.00 2.212±0.00 0.729±0.10 5.595±0.00 1.175±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002PK CIL_0002PK_0002 CGP X:100622883-100727214

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005829 ISS cytosol
GO:0008022 ISS protein C-terminus binding
GO:0008150 ND biological_process
GO:0016323 ISS basolateral plasma membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000239666 PDZD11-007 protein_coding Homo_sapiens 0 664
ENST00000374454 PDZD11-005 protein_coding Homo_sapiens 0 652
ENST00000435029 KIF4B-001 protein_coding Homo_sapiens 0.00000004 66
ENST00000473667 PDZD11-008 processed_transcript Homo_sapiens 0 483
ENST00000486461 PDZD11-006 processed_transcript Homo_sapiens 0 420
ENST00000554427 RP1-261D10.1-001 processed_pseudogene Homo_sapiens 0 534

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