C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: PDZ domain containing 11
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000059099 Pdzd11-001 ENSMUSG00000015668 10090 - X:100622908-100625935 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000059099
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000059099 11.716±2.79 2.815±0.48 15.862±2.24 17.226±1.67 4.599±1.01 5.058±0.81 5.988±1.08 9.560±1.42 12.249±10.09 7.515±0.68 5.138±1.09 9.388±9.04 33.619±8.41 2.268±0.49

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002PK CIL_0002PK_0002 CGP X:100622883-100727214

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005829 ISS cytosol
GO:0008022 ISS protein C-terminus binding
GO:0008150 ND biological_process
GO:0016323 ISS basolateral plasma membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000239666 PDZD11-007 protein_coding Homo_sapiens 0 664
ENST00000374454 PDZD11-005 protein_coding Homo_sapiens 0 652
ENST00000473667 PDZD11-008 processed_transcript Homo_sapiens 0 483
ENST00000486461 PDZD11-006 processed_transcript Homo_sapiens 0 422
ENST00000554427 RP1-261D10.1-001 processed_pseudogene Homo_sapiens 0 534

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