C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002PK_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000120509-ENSG00000090889 CGP 9606 X:70286595-70420832
GeneTranscriptPositionBiotype
ENSG00000090889 (KIF4A)
kinesin family member 4A 		ENST00000374403 (KIF4A-001) 70290090-70420832 protein_coding
ENST00000485406 (KIF4A-002) 70290112-70297188 processed_transcript
ENSG00000120509 (PDZD11)
PDZ domain containing 11 		ENST00000239666 (PDZD11-007) 70286595-70289979 protein_coding
ENST00000374454 (PDZD11-005) 70286892-70289945 protein_coding
ENST00000473667 (PDZD11-008) 70287735-70289913 processed_transcript
ENST00000486461 (PDZD11-006) 70287767-70290514 processed_transcript
ENSG00000201377 (RNY4P23)
RNA, Ro-associated Y4 pseudogene 23 		ENST00000364507 (RNY4P23-201) 70396279-70396375 misc_RNA
CIL_0002PK_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000015668-ENSMUSG00000034311 CGP 10090 X:100622883-100727214
GeneTranscriptPositionBiotype
ENSMUSG00000015668 (Pdzd11)
PDZ domain containing 11 		ENSMUST00000015812 (Pdzd11-003) 100622886-100626568 protein_coding
ENSMUST00000059099 (Pdzd11-001) 100622908-100625935 protein_coding
ENSMUST00000144643 (Pdzd11-002) 100622883-100625938 retained_intron
ENSMUST00000151548 (Pdzd11-004) 100623377-100626271 processed_transcript
ENSMUSG00000034311 (Kif4)
kinesin family member 4 		ENSMUST00000048962 (Kif4-001) 100625737-100727214 protein_coding
ENSMUST00000145319 (Kif4-003) 100712127-100724650 processed_transcript
ENSMUST00000156386 (Kif4-002) 100633960-100636307 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002PK_0001ENSG00000090889ENST00000374403ENST00000485406ENSG00000120509ENST00000239666ENST00000374454ENST00000473667ENST00000486461ENSG00000201377ENST00000364507CIL_0002PK_0002ENSMUSG00000015668ENSMUST00000015812ENSMUST00000059099ENSMUST00000144643ENSMUST00000151548ENSMUSG00000034311ENSMUST00000048962ENSMUST00000145319ENSMUST00000156386
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002PK_0001ENSG00000090889ENST00000374403ENSG00000120509ENST00000239666ENST00000374454ENSG00000201377ENST00000364507CIL_0002PK_0002ENSMUSG00000015668ENSMUST00000015812ENSMUST00000059099ENSMUST00000144643ENSMUST00000151548ENSMUSG00000034311ENSMUST00000048962
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000090889 ENST00000374403 N/A N/A 0.056±0.00 N/A 0.274±0.00 1.145±0.00 N/A N/A N/A 0.103±0.00 N/A 5.466±5.49 2.550±1.94 1.564±0.45
ENST00000485406 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000120509 ENST00000239666 10.120±0.00 11.896±0.00 0.423±0.00 16.655±4.08 8.097±4.78 19.309±0.00 5.457±5.05 13.493±8.04 8.562±0.00 6.738±3.85 3.831±2.46 16.344±7.56 18.384±1.97 8.708±5.63
ENST00000374454 2.244±0.00 4.251±0.00 N/A 6.506±0.00 3.149±0.00 N/A 2.336±0.00 2.070±0.00 N/A N/A N/A N/A N/A N/A
ENST00000473667 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486461 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000201377 ENST00000364507 N/A N/A N/A 0.191±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000015668 ENSMUST00000015812 2.612±0.00 N/A N/A N/A N/A N/A 1.854±0.77 7.602±0.00 2.212±0.00 N/A 0.729±0.10 N/A 5.595±0.00 1.175±0.00
ENSMUST00000059099 11.716±2.79 2.815±0.48 15.862±2.24 17.226±1.67 4.599±1.01 5.058±0.81 5.988±1.08 9.560±1.42 12.249±10.09 7.515±0.68 5.138±1.09 9.388±9.04 33.619±8.41 2.268±0.49
ENSMUST00000144643 N/A N/A N/A N/A N/A N/A N/A N/A 0.960±0.00 N/A 0.634±0.00 3.302±0.00 N/A N/A
ENSMUST00000151548 N/A N/A N/A N/A 4.958±3.34 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000034311 ENSMUST00000048962 0.930±0.02 0.611±0.08 N/A 2.678±1.79 0.258±0.02 1.395±0.22 N/A N/A 9.065±3.39 0.445±0.03 N/A 2.057±1.03 6.042±3.08 0.689±0.29
ENSMUST00000145319 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156386 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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