C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: non-SMC condensin I complex, subunit G
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000015880 Ncapg 10090 + 5:45669922-45700544 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000117396 Ncapg-001 45669922-45700544 protein_coding
  ENSMUST00000123396 Ncapg-005 45698666-45700070 retained_intron
  ENSMUST00000129562 Ncapg-004 45677864-45680026 retained_intron
  ENSMUST00000134090 Ncapg-003 45692050-45696930 retained_intron
  ENSMUST00000134309 Ncapg-002 45676013-45700125 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonLiverLungOvaryPlacentaTestisENSMUST00000117396ENSMUST00000134090
Transcript ID Adipose Adrenal Brain Breast Colon Liver Lung Ovary Placenta Testis
ENSMUST00000117396 0.692±0.00 0.401±0.07 3.998±0.37 0.479±0.07 1.029±0.35 5.337±0.00 0.360±0.08 1.976±1.17 5.987±4.56 6.559±3.65
ENSMUST00000134090 N/A N/A N/A N/A N/A N/A N/A 0.677±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00032I CIL_00032I_0002 CGP 5:45529706-45700544
CIL_0002OQ CIL_0002OQ_0002 CGP 5:45669922-45857615

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000793 IDA condensed chromosome
GO:0000796 IEA condensin complex
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005737 IDA cytoplasm
GO:0005813 IEA centrosome
GO:0007076 IEA mitotic chromosome condensation
GO:0015629 IEA actin cytoskeleton
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000070109 ncapg non-SMC condensin I complex, subunit G protein_coding Danio_rerio
ENSG00000109805 NCAPG non-SMC condensin I complex, subunit G protein_coding Homo_sapiens

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