C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002OQ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000109805-ENSG00000178177 CGP 9606 4:17810902-18021876
GeneTranscriptPositionBiotype
ENSG00000109805 (NCAPG)
non-SMC condensin I complex, subunit G 		ENST00000251496 (NCAPG-001) 17810902-17844862 protein_coding
ENST00000509719 (NCAPG-004) 17817232-17823147 retained_intron
ENST00000510063 (NCAPG-005) 17823699-17837161 protein_coding
ENST00000513226 (NCAPG-003) 17811028-17813346 retained_intron
ENST00000514176 (NCAPG-002) 17811022-17843448 nonsense_mediated_decay
ENSG00000178177 (LCORL)
ligand dependent nuclear receptor corepressor-like 		ENST00000326877 (LCORL-001) 17841199-18021876 protein_coding
ENST00000382224 (LCORL-002) 17880595-18020734 protein_coding
ENST00000382226 (LCORL-201) 17880629-18021860 protein_coding
ENST00000510121 (LCORL-003) 17845640-17962032 processed_transcript
ENST00000510451 (LCORL-004) 17845497-18021757 nonsense_mediated_decay
ENST00000512376 (LCORL-005) 17960246-18021755 processed_transcript
ENSG00000235413 (KRT18P63)
keratin 18 pseudogene 63 		ENST00000505463 (KRT18P63-001) 17911674-17912976 processed_pseudogene
CIL_0002OQ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000015880-ENSMUSG00000015882 CGP 10090 5:45669922-45857615
GeneTranscriptPositionBiotype
ENSMUSG00000015880 (Ncapg)
non-SMC condensin I complex, subunit G 		ENSMUST00000117396 (Ncapg-001) 45669922-45700544 protein_coding
ENSMUST00000123396 (Ncapg-005) 45698666-45700070 retained_intron
ENSMUST00000129562 (Ncapg-004) 45677864-45680026 retained_intron
ENSMUST00000134090 (Ncapg-003) 45692050-45696930 retained_intron
ENSMUST00000134309 (Ncapg-002) 45676013-45700125 retained_intron
ENSMUSG00000015882 (Lcorl)
ligand dependent nuclear receptor corepressor-like 		ENSMUST00000016026 (Lcorl-002) 45730332-45857499 protein_coding
ENSMUST00000045586 (Lcorl-001) 45697181-45857615 protein_coding
ENSMUST00000067997 (Lcorl-003) 45773322-45857501 protein_coding
ENSMUST00000087164 (Lcorl-005) 45730335-45856551 protein_coding
ENSMUST00000121573 (Lcorl-004) 45700450-45856552 protein_coding
ENSMUST00000156295 (Lcorl-006) 45775259-45857615 retained_intron
ENSMUST00000186633 (Lcorl-008) 45747284-45857497 nonsense_mediated_decay
ENSMUST00000187615 (Lcorl-009) 45747276-45857481 nonsense_mediated_decay
ENSMUST00000189859 (Lcorl-010) 45747255-45857479 protein_coding
ENSMUST00000190036 (Lcorl-007) 45699291-45857498 protein_coding
ENSMUSG00000101587 (RP23-7E4.5)
predicted gene 29036 		ENSMUST00000189967 (RP23-7E4.5-001) 45768870-45769664 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002OQ_0001ENSG00000109805ENST00000251496ENST00000509719ENST00000510063ENST00000513226ENST00000514176ENSG00000178177ENST00000326877ENST00000382224ENST00000382226ENST00000510121ENST00000510451ENST00000512376ENSG00000235413ENST00000505463CIL_0002OQ_0002ENSMUSG00000015880ENSMUST00000117396ENSMUST00000123396ENSMUST00000129562ENSMUST00000134090ENSMUST00000134309ENSMUSG00000015882ENSMUST00000016026ENSMUST00000045586ENSMUST00000067997ENSMUST00000087164ENSMUST00000121573ENSMUST00000156295ENSMUST00000186633ENSMUST00000187615ENSMUST00000189859ENSMUST00000190036ENSMUSG00000101587ENSMUST00000189967
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002OQ_0001ENSG00000109805ENST00000251496ENST00000514176ENSG00000178177ENST00000326877ENST00000382224ENST00000382226ENST00000510451ENSG00000235413ENST00000505463CIL_0002OQ_0002ENSMUSG00000015880ENSMUST00000117396ENSMUST00000134090ENSMUSG00000015882ENSMUST00000016026ENSMUST00000045586ENSMUST00000067997ENSMUST00000087164ENSMUST00000121573ENSMUST00000156295ENSMUST00000186633ENSMUST00000187615ENSMUSG00000101587ENSMUST00000189967
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000109805 ENST00000251496 N/A N/A N/A N/A 0.382±0.00 N/A N/A N/A N/A N/A N/A N/A 0.154±0.00 N/A
ENST00000509719 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510063 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513226 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514176 N/A N/A N/A N/A 0.610±0.00 1.710±0.00 N/A 0.307±0.00 N/A N/A N/A 2.188±0.85 1.819±1.60 6.373±1.18
ENSG00000178177 ENST00000326877 1.248±0.00 0.325±0.00 N/A 0.413±0.11 0.336±0.00 0.611±0.00 0.245±0.02 0.937±0.00 0.448±0.00 0.776±0.00 0.548±0.00 0.527±0.24 0.231±0.00 1.557±0.00
ENST00000382224 0.507±0.00 N/A 1.245±0.00 0.696±0.00 0.883±0.00 1.040±0.65 0.160±0.00 N/A 0.919±0.00 1.492±0.00 0.759±0.00 0.311±0.00 N/A 0.757±0.00
ENST00000382226 N/A 0.598±0.00 N/A 0.334±0.00 0.349±0.17 N/A 0.336±0.00 0.759±0.00 0.244±0.00 0.203±0.00 0.371±0.00 0.620±0.38 0.879±0.59 2.535±1.37
ENST00000510121 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510451 N/A N/A N/A 1.307±0.00 N/A N/A N/A N/A 2.166±0.00 2.524±0.00 1.516±0.00 N/A N/A N/A
ENST00000512376 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000235413 ENST00000505463 N/A N/A N/A 0.092±0.00 N/A N/A 0.049±0.03 0.065±0.00 N/A 0.064±0.00 N/A 0.067±0.02 N/A 0.024±0.01
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000015880 ENSMUST00000117396 0.692±0.00 0.401±0.07 N/A 3.998±0.37 0.479±0.07 1.029±0.35 N/A N/A 5.337±0.00 0.360±0.08 N/A 1.976±1.17 5.987±4.56 6.559±3.65
ENSMUST00000123396 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000129562 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134090 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.677±0.00 N/A N/A
ENSMUST00000134309 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000015882 ENSMUST00000016026 0.305±0.14 N/A 0.769±0.35 2.067±1.02 0.337±0.07 0.811±0.10 0.200±0.02 0.273±0.10 0.281±0.05 0.657±0.04 0.352±0.08 1.280±0.45 0.598±0.50 2.575±0.00
ENSMUST00000045586 0.548±0.00 0.504±0.16 0.373±0.08 4.346±3.00 0.485±0.15 0.549±0.11 0.077±0.01 0.426±0.01 1.074±0.79 0.503±0.11 0.125±0.04 0.896±0.45 0.146±0.00 0.909±0.08
ENSMUST00000067997 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.776±0.00 N/A N/A
ENSMUST00000087164 0.421±0.00 0.424±0.04 N/A N/A 0.527±0.09 N/A N/A 0.149±0.00 N/A 0.266±0.00 N/A 1.233±0.48 N/A 2.513±0.49
ENSMUST00000121573 N/A 0.503±0.00 N/A 0.591±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156295 N/A 1.512±0.43 N/A N/A 0.634±0.11 1.919±0.82 N/A 1.422±0.00 0.889±0.00 1.264±0.09 N/A 1.715±0.25 N/A N/A
ENSMUST00000186633 N/A 1.068±0.00 N/A N/A N/A 2.236±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000187615 N/A N/A N/A N/A N/A N/A N/A N/A 1.253±0.00 1.119±0.00 N/A N/A N/A N/A
ENSMUST00000189859 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000190036 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000101587 ENSMUST00000189967 0.140±0.05 N/A 0.075±0.05 0.166±0.08 0.132±0.04 0.347±0.17 N/A 0.201±0.09 0.075±0.03 0.162±0.00 0.056±0.00 0.311±0.22 0.096±0.04 0.145±0.05

Loading