C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: non-SMC condensin I complex, subunit G
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000117396 Ncapg-001 ENSMUSG00000015880 10090 + 5:45669922-45700544 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonLiverLungOvaryPlacentaTestisENSMUST00000117396
Transcript ID Adipose Adrenal Brain Breast Colon Liver Lung Ovary Placenta Testis
ENSMUST00000117396 0.692±0.00 0.401±0.07 3.998±0.37 0.479±0.07 1.029±0.35 5.337±0.00 0.360±0.08 1.976±1.17 5.987±4.56 6.559±3.65

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00032I CIL_00032I_0002 CGP 5:45529706-45700544
CIL_0002OQ CIL_0002OQ_0002 CGP 5:45669922-45857615

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000793 IDA condensed chromosome
GO:0000796 IEA condensin complex
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005737 IDA cytoplasm
GO:0005813 IEA centrosome
GO:0007076 IEA mitotic chromosome condensation
GO:0015629 IEA actin cytoskeleton
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000251496 NCAPG-001 protein_coding Homo_sapiens 0 3206
ENST00000505112 CTC-820M8.1-001 processed_pseudogene Homo_sapiens 0 1208
ENST00000509719 NCAPG-004 retained_intron Homo_sapiens 0 579
ENST00000510063 NCAPG-005 protein_coding Homo_sapiens 0 776
ENST00000513226 NCAPG-003 retained_intron Homo_sapiens 0 617
ENST00000514176 NCAPG-002 nonsense_mediated_decay Homo_sapiens 0 2152

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