C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: GTF2I repeat domain containing 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000123941 Gtf2ird2-002 ENSMUSG00000015942 10090 + 5:134184019-134224355 nonsense_mediated_decay

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00051K CIL_00051K_0002 CGP 5:134148054-134224355

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0014883 IDA transition between fast and slow fiber

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000394939 GTF2IRD2B-007 retained_intron Homo_sapiens 0 401
ENST00000418185 GTF2IRD2B-002 nonsense_mediated_decay Homo_sapiens 0 401
ENST00000424290 GTF2IP2-001 unprocessed_pseudogene Homo_sapiens 0.00000007 62
ENST00000449689 GTF2IRD2P1-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 730
ENST00000451013 GTF2IRD2-001 protein_coding Homo_sapiens 0 747
ENST00000472837 GTF2IRD2B-001 protein_coding Homo_sapiens 0 747
ENST00000484624 GTF2IRD2-006 retained_intron Homo_sapiens 2e-18 99
ENST00000610955 GTF2IRD2-008 retained_intron Homo_sapiens 0 401
ENST00000611835 GTF2IRD2B-006 retained_intron Homo_sapiens 0 492
ENST00000618962 GTF2IRD2P1-003 retained_intron Homo_sapiens 0 486
ENST00000619142 GTF2IRD2B-004 protein_coding Homo_sapiens 0 747
ENST00000620147 GTF2IRD2P1-002 processed_transcript Homo_sapiens 0 669

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