C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: teneurin transmembrane protein 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000016150 Tenm1 10090 - X:42527866-43429126 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000016294 Tenm1-201 42532391-43274786 protein_coding
  ENSMUST00000115058 Tenm1-005 42527866-43167817 protein_coding
  ENSMUST00000115059 Tenm1-001 42527866-43167838 protein_coding
  ENSMUST00000125231 Tenm1-003 43323955-43429003 processed_transcript
  ENSMUST00000126161 Tenm1-002 42897135-43429126 retained_intron
  ENSMUST00000154433 Tenm1-004 42824358-43429003 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000016294ENSMUST00000115058ENSMUST00000115059ENSMUST00000125231ENSMUST00000154433
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000016294 0.003±0.00 0.063±0.00 N/A 0.811±0.00 0.023±0.01 N/A 0.006±0.00 N/A 0.004±0.00 0.018±0.00 0.047±0.00 0.005±0.00 0.005±0.00
ENSMUST00000115058 0.241±0.00 N/A 0.003±0.00 N/A 0.032±0.01 0.009±0.00 0.010±0.00 N/A 0.004±0.00 N/A 0.006±0.00 0.003±0.00 N/A
ENSMUST00000115059 N/A N/A N/A 0.995±0.00 N/A 0.009±0.00 N/A N/A 0.001±0.00 N/A 0.010±0.00 0.001±0.00 N/A
ENSMUST00000125231 0.642±0.05 N/A 0.025±0.00 N/A N/A 0.048±0.00 0.041±0.02 0.053±0.00 0.027±0.01 N/A 0.196±0.10 N/A N/A
ENSMUST00000154433 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.021±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007YQ CIL_0007YQ_0002 VISTA X:42042580-42644283
CIL_0000AX CIL_0000AX_0002 CGP X:42149317-42529330
CIL_0000AW CIL_0000AW_0002 CGP X:42502453-43429126

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005576 IEA extracellular region
GO:0005634 ISS nucleus
GO:0005737 ISS cytoplasm
GO:0005783 ISS endoplasmic reticulum
GO:0005794 ISS Golgi apparatus
GO:0005856 ISS cytoskeleton
GO:0005886 ISS plasma membrane
GO:0005887 IDA integral component of plasma membrane
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006359 IDA regulation of transcription from RNA polymerase III promoter
GO:0006950 IEA response to stress
GO:0007165 IEA signal transduction
GO:0007218 IEA neuropeptide signaling pathway
GO:0016363 ISS nuclear matrix
GO:0016607 ISS nuclear speck
GO:0030838 IDA positive regulation of actin filament polymerization
GO:0033138 IDA positive regulation of peptidyl-serine phosphorylation
GO:0042803 IDA protein homodimerization activity
GO:0043406 IDA positive regulation of MAP kinase activity
GO:0046982 IDA protein heterodimerization activity
GO:0048471 IDA perinuclear region of cytoplasm
GO:0051491 IDA positive regulation of filopodium assembly
GO:0090316 ISS positive regulation of intracellular protein transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000003403 tenm1 teneurin transmembrane protein 1 protein_coding Danio_rerio
ENSG00000009694 TENM1 teneurin transmembrane protein 1 protein_coding Homo_sapiens

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