C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: teneurin transmembrane protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000016294 Tenm1-201 ENSMUSG00000016150 10090 - X:42532391-43274786 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastHeartLiverLungOvaryPlacentaTestisENSMUST00000016294
Transcript ID Adipose Adrenal Brain Breast Heart Liver Lung Ovary Placenta Testis
ENSMUST00000016294 0.003±0.00 0.063±0.00 0.811±0.00 0.023±0.01 0.006±0.00 0.004±0.00 0.018±0.00 0.047±0.00 0.005±0.00 0.005±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007YQ CIL_0007YQ_0002 VISTA X:42042580-42644283
CIL_0000AX CIL_0000AX_0002 CGP X:42149317-42529330
CIL_0000AW CIL_0000AW_0002 CGP X:42502453-43429126

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005576 IEA extracellular region
GO:0005634 ISS nucleus
GO:0005737 ISS cytoplasm
GO:0005783 ISS endoplasmic reticulum
GO:0005794 ISS Golgi apparatus
GO:0005856 ISS cytoskeleton
GO:0005886 ISS plasma membrane
GO:0005887 IDA integral component of plasma membrane
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006359 IDA regulation of transcription from RNA polymerase III promoter
GO:0006950 IEA response to stress
GO:0007218 IEA neuropeptide signaling pathway
GO:0016363 ISS nuclear matrix
GO:0016607 ISS nuclear speck
GO:0030838 IDA positive regulation of actin filament polymerization
GO:0033138 IDA positive regulation of peptidyl-serine phosphorylation
GO:0042803 IDA protein homodimerization activity
GO:0043406 IDA positive regulation of MAP kinase activity
GO:0046982 IDA protein heterodimerization activity
GO:0048471 IDA perinuclear region of cytoplasm
GO:0051491 IDA positive regulation of filopodium assembly
GO:0090316 ISS positive regulation of intracellular protein transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000371130 TENM1-001 protein_coding Homo_sapiens 0 11230
ENST00000422452 TENM1-201 protein_coding Homo_sapiens 0 11360
ENST00000461429 TENM1-002 processed_transcript Homo_sapiens 0 573
ENST00000469481 STAG2-010 processed_transcript Homo_sapiens 0 375

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