C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000AW_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000183918-ENSG00000009694 CGP 9606 X:124346344-124963817
GeneTranscriptPositionBiotype
ENSG00000009694 (TENM1)
teneurin transmembrane protein 1 		ENST00000371130 (TENM1-001) 124375903-124963817 protein_coding
ENST00000422452 (TENM1-201) 124375908-124963817 protein_coding
ENST00000461429 (TENM1-002) 124453459-124497143 processed_transcript
ENSG00000183918 (SH2D1A)
SH2 domain containing 1A 		ENST00000360027 (SH2D1A-006) 124346525-124371488 protein_coding
ENST00000371139 (SH2D1A-002) 124346344-124373155 protein_coding
ENST00000477673 (SH2D1A-005) 124346589-124371488 protein_coding
ENST00000491950 (SH2D1A-003) 124346589-124371488 processed_transcript
ENST00000494073 (SH2D1A-004) 124346589-124371488 processed_transcript
ENSG00000236880 (RP3-384D21.2)
 ENST00000415547 (RP3-384D21.2-001) 124688504-124688838 processed_pseudogene
CIL_0000AW_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000005696-ENSMUSG00000016150 CGP 10090 X:42502453-43429126
GeneTranscriptPositionBiotype
ENSMUSG00000005696 (Sh2d1a)
SH2 domain containing 1A 		ENSMUST00000005839 (Sh2d1a-001) 42502562-42522093 protein_coding
ENSMUST00000101619 (Sh2d1a-007) 42526585-42529330 retained_intron
ENSMUST00000115070 (Sh2d1a-002) 42502654-42522093 protein_coding
ENSMUST00000128393 (Sh2d1a-005) 42514313-42521970 processed_transcript
ENSMUST00000129855 (Sh2d1a-003) 42502453-42523697 processed_transcript
ENSMUST00000153948 (Sh2d1a-004) 42502760-42521872 protein_coding
ENSMUST00000189753 (Sh2d1a-006) 42502497-42529326 protein_coding
ENSMUSG00000016150 (Tenm1)
teneurin transmembrane protein 1 		ENSMUST00000016294 (Tenm1-201) 42532391-43274786 protein_coding
ENSMUST00000115058 (Tenm1-005) 42527866-43167817 protein_coding
ENSMUST00000115059 (Tenm1-001) 42527866-43167838 protein_coding
ENSMUST00000125231 (Tenm1-003) 43323955-43429003 processed_transcript
ENSMUST00000126161 (Tenm1-002) 42897135-43429126 retained_intron
ENSMUST00000154433 (Tenm1-004) 42824358-43429003 retained_intron
ENSMUSG00000081300 (Gm14587)
predicted gene 14587 		ENSMUST00000121714 (Gm14587-001) 43412086-43412743 processed_pseudogene
ENSMUSG00000083098 (Gm14578)
predicted gene 14578 		ENSMUST00000122166 (Gm14578-001) 42888730-42889120 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000AW_0001ENSG00000009694ENST00000371130ENST00000422452ENST00000461429ENSG00000183918ENST00000360027ENST00000371139ENST00000477673ENST00000491950ENST00000494073ENSG00000236880ENST00000415547CIL_0000AW_0002ENSMUSG00000005696ENSMUST00000005839ENSMUST00000101619ENSMUST00000115070ENSMUST00000128393ENSMUST00000129855ENSMUST00000153948ENSMUST00000189753ENSMUSG00000016150ENSMUST00000016294ENSMUST00000115058ENSMUST00000115059ENSMUST00000125231ENSMUST00000126161ENSMUST00000154433ENSMUSG00000081300ENSMUST00000121714ENSMUSG00000083098ENSMUST00000122166
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000AW_0001ENSG00000009694ENST00000371130ENST00000422452ENSG00000183918ENST00000360027ENST00000371139ENST00000494073ENSG00000236880ENST00000415547CIL_0000AW_0002ENSMUSG00000005696ENSMUST00000005839ENSMUST00000115070ENSMUST00000128393ENSMUST00000129855ENSMUST00000153948ENSMUST00000189753ENSMUSG00000016150ENSMUST00000016294ENSMUST00000115058ENSMUST00000115059ENSMUST00000125231ENSMUST00000154433ENSMUSG00000081300ENSMUST00000121714ENSMUSG00000083098ENSMUST00000122166
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000009694 ENST00000371130 N/A N/A 1.261±0.00 N/A N/A N/A N/A N/A 0.398±0.00 N/A N/A N/A N/A N/A
ENST00000422452 N/A N/A N/A 0.926±0.00 N/A N/A N/A 2.973±0.00 N/A N/A N/A N/A N/A N/A
ENST00000461429 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000183918 ENST00000360027 N/A N/A N/A 0.066±0.00 2.354±0.00 1.290±0.00 0.056±0.00 0.126±0.00 0.195±0.00 2.115±0.00 N/A N/A N/A 0.087±0.00
ENST00000371139 N/A 0.639±0.00 0.062±0.00 0.053±0.03 N/A N/A 0.021±0.00 N/A 0.134±0.00 1.043±0.30 0.035±0.00 0.118±0.01 0.086±0.01 0.175±0.00
ENST00000477673 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491950 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494073 N/A N/A N/A N/A N/A N/A 0.048±0.00 N/A N/A N/A N/A N/A 0.269±0.00 N/A
ENSG00000236880 ENST00000415547 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.106±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000005696 ENSMUST00000005839 0.045±0.00 N/A 0.135±0.02 N/A 0.984±0.43 0.099±0.00 0.302±0.00 0.279±0.14 0.037±0.02 0.435±0.07 0.145±0.00 0.241±0.04 0.062±0.00 N/A
ENSMUST00000101619 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000115070 N/A N/A N/A N/A N/A N/A N/A 0.055±0.00 0.083±0.00 N/A N/A 0.047±0.00 N/A 0.097±0.00
ENSMUST00000128393 N/A N/A 0.059±0.00 N/A N/A N/A N/A 0.177±0.00 N/A N/A N/A N/A 0.075±0.00 0.195±0.04
ENSMUST00000129855 N/A N/A N/A N/A N/A N/A 0.019±0.00 N/A 0.003±0.00 N/A 0.014±0.00 0.018±0.01 N/A N/A
ENSMUST00000153948 N/A N/A N/A N/A N/A N/A N/A N/A 0.121±0.01 N/A N/A N/A 0.196±0.06 N/A
ENSMUST00000189753 N/A 0.191±0.11 N/A N/A 0.991±0.33 N/A 0.096±0.00 0.100±0.00 0.132±0.08 0.317±0.07 N/A 0.257±0.16 0.018±0.00 0.078±0.05
ENSMUSG00000016150 ENSMUST00000016294 0.003±0.00 0.063±0.00 N/A 0.811±0.00 0.023±0.01 N/A 0.006±0.00 N/A 0.004±0.00 0.018±0.00 N/A 0.047±0.00 0.005±0.00 0.005±0.00
ENSMUST00000115058 0.241±0.00 N/A 0.003±0.00 N/A 0.032±0.01 0.009±0.00 0.010±0.00 N/A 0.004±0.00 N/A N/A 0.006±0.00 0.003±0.00 N/A
ENSMUST00000115059 N/A N/A N/A 0.995±0.00 N/A 0.009±0.00 N/A N/A 0.001±0.00 N/A N/A 0.010±0.00 0.001±0.00 N/A
ENSMUST00000125231 0.642±0.05 N/A 0.025±0.00 N/A N/A 0.048±0.00 0.041±0.02 0.053±0.00 0.027±0.01 N/A N/A 0.196±0.10 N/A N/A
ENSMUST00000126161 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154433 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.021±0.01
ENSMUSG00000081300 ENSMUST00000121714 N/A N/A N/A 0.048±0.02 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000083098 ENSMUST00000122166 N/A N/A N/A 0.070±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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