C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000AX_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000101972-ENSG00000101972 CGP 9606 X:123960212-124422664
GeneTranscriptPositionBiotype
ENSG00000009694 (TENM1)
teneurin transmembrane protein 1 		ENST00000371130 (TENM1-001) 124375903-124963817 protein_coding
ENST00000422452 (TENM1-201) 124375908-124963817 protein_coding
ENST00000461429 (TENM1-002) 124453459-124497143 processed_transcript
ENSG00000183918 (SH2D1A)
SH2 domain containing 1A 		ENST00000360027 (SH2D1A-006) 124346525-124371488 protein_coding
ENST00000371139 (SH2D1A-002) 124346344-124373155 protein_coding
ENST00000477673 (SH2D1A-005) 124346589-124371488 protein_coding
ENST00000491950 (SH2D1A-003) 124346589-124371488 processed_transcript
ENST00000494073 (SH2D1A-004) 124346589-124371488 processed_transcript
ENSG00000226532 (RP5-1052M9.1)
 ENST00000412004 (RP5-1052M9.1-001) 124326175-124326258 processed_pseudogene
ENSG00000229825 (RP5-1052M9.4)
 ENST00000418891 (RP5-1052M9.4-001) 124332918-124333376 processed_pseudogene
ENSG00000232054 (NPM1P34)
nucleophosmin 1 (nucleolar phosphoprotein B23, numatrin) pseudogene 34 		ENST00000428821 (NPM1P34-001) 124280530-124281422 processed_pseudogene
ENSG00000234564 (HSPA8P20)
heat shock 70kDa protein 8 pseudogene 20 		ENST00000448737 (HSPA8P20-001) 124204499-124205806 processed_pseudogene
ENSG00000237426 (ZIK1P1)
zinc finger protein interacting with K protein 1 pseudogene 1 		ENST00000456074 (ZIK1P1-001) 124173001-124174459 processed_pseudogene
CIL_0000AX_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000025862-ENSMUSG00000005696 CGP 10090 X:42149317-42529330
GeneTranscriptPositionBiotype
ENSMUSG00000005696 (Sh2d1a)
SH2 domain containing 1A 		ENSMUST00000005839 (Sh2d1a-001) 42502562-42522093 protein_coding
ENSMUST00000101619 (Sh2d1a-007) 42526585-42529330 retained_intron
ENSMUST00000115070 (Sh2d1a-002) 42502654-42522093 protein_coding
ENSMUST00000128393 (Sh2d1a-005) 42514313-42521970 processed_transcript
ENSMUST00000129855 (Sh2d1a-003) 42502453-42523697 processed_transcript
ENSMUST00000153948 (Sh2d1a-004) 42502760-42521872 protein_coding
ENSMUST00000189753 (Sh2d1a-006) 42502497-42529326 protein_coding
ENSMUSG00000016150 (Tenm1)
teneurin transmembrane protein 1 		ENSMUST00000016294 (Tenm1-201) 42532391-43274786 protein_coding
ENSMUST00000115058 (Tenm1-005) 42527866-43167817 protein_coding
ENSMUST00000115059 (Tenm1-001) 42527866-43167838 protein_coding
ENSMUST00000125231 (Tenm1-003) 43323955-43429003 processed_transcript
ENSMUST00000126161 (Tenm1-002) 42897135-43429126 retained_intron
ENSMUST00000154433 (Tenm1-004) 42824358-43429003 retained_intron
ENSMUSG00000025862 (Stag2)
stromal antigen 2 		ENSMUST00000069619 (Stag2-001) 42150701-42277185 protein_coding
ENSMUST00000115072 (Stag2-201) 42149412-42277175 protein_coding
ENSMUST00000115073 (Stag2-002) 42149317-42277185 protein_coding
ENSMUST00000123245 (Stag2-007) 42151014-42206124 protein_coding
ENSMUST00000127618 (Stag2-006) 42149683-42206121 protein_coding
ENSMUST00000128799 (Stag2-005) 42152180-42221029 protein_coding
ENSMUST00000136323 (Stag2-003) 42149541-42212680 retained_intron
ENSMUST00000141414 (Stag2-004) 42150154-42211419 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000AX_0001ENSG00000009694ENST00000371130ENST00000422452ENST00000461429ENSG00000183918ENST00000360027ENST00000371139ENST00000477673ENST00000491950ENST00000494073ENSG00000226532ENST00000412004ENSG00000229825ENST00000418891ENSG00000232054ENST00000428821ENSG00000234564ENST00000448737ENSG00000237426ENST00000456074CIL_0000AX_0002ENSMUSG00000005696ENSMUST00000005839ENSMUST00000101619ENSMUST00000115070ENSMUST00000128393ENSMUST00000129855ENSMUST00000153948ENSMUST00000189753ENSMUSG00000016150ENSMUST00000016294ENSMUST00000115058ENSMUST00000115059ENSMUST00000125231ENSMUST00000126161ENSMUST00000154433ENSMUSG00000025862ENSMUST00000069619ENSMUST00000115072ENSMUST00000115073ENSMUST00000123245ENSMUST00000127618ENSMUST00000128799ENSMUST00000136323ENSMUST00000141414
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000AX_0001ENSG00000009694ENST00000371130ENST00000422452ENSG00000183918ENST00000360027ENST00000371139ENST00000494073ENSG00000226532ENST00000412004ENSG00000229825ENST00000418891ENSG00000232054ENST00000428821ENSG00000234564ENST00000448737ENSG00000237426ENST00000456074CIL_0000AX_0002ENSMUSG00000005696ENSMUST00000005839ENSMUST00000115070ENSMUST00000128393ENSMUST00000129855ENSMUST00000153948ENSMUST00000189753ENSMUSG00000016150ENSMUST00000016294ENSMUST00000115058ENSMUST00000115059ENSMUST00000125231ENSMUST00000154433ENSMUSG00000025862ENSMUST00000069619ENSMUST00000115072ENSMUST00000115073
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000009694 ENST00000371130 N/A N/A 1.261±0.00 N/A N/A N/A N/A N/A 0.398±0.00 N/A N/A N/A N/A N/A
ENST00000422452 N/A N/A N/A 0.926±0.00 N/A N/A N/A 2.973±0.00 N/A N/A N/A N/A N/A N/A
ENST00000461429 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000183918 ENST00000360027 N/A N/A N/A 0.066±0.00 2.354±0.00 1.290±0.00 0.056±0.00 0.126±0.00 0.195±0.00 2.115±0.00 N/A N/A N/A 0.087±0.00
ENST00000371139 N/A 0.639±0.00 0.062±0.00 0.053±0.03 N/A N/A 0.021±0.00 N/A 0.134±0.00 1.043±0.30 0.035±0.00 0.118±0.01 0.086±0.01 0.175±0.00
ENST00000477673 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491950 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494073 N/A N/A N/A N/A N/A N/A 0.048±0.00 N/A N/A N/A N/A N/A 0.269±0.00 N/A
ENSG00000226532 ENST00000412004 N/A 0.333±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 38.049±0.00 N/A N/A
ENSG00000229825 ENST00000418891 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.226±0.18
ENSG00000232054 ENST00000428821 0.048±0.00 0.025±0.00 N/A N/A 0.036±0.00 0.077±0.07 0.011±0.00 0.025±0.00 N/A N/A 0.011±0.00 0.026±0.01 N/A 0.011±0.00
ENSG00000234564 ENST00000448737 N/A N/A N/A N/A N/A N/A 0.010±0.00 N/A N/A N/A 0.010±0.00 N/A N/A N/A
ENSG00000237426 ENST00000456074 0.010±0.00 0.121±0.00 N/A 0.011±0.00 0.020±0.00 0.075±0.00 0.009±0.00 0.030±0.00 0.009±0.00 N/A 0.079±0.00 0.016±0.01 0.021±0.00 0.125±0.01
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000005696 ENSMUST00000005839 0.045±0.00 N/A 0.135±0.02 N/A 0.984±0.43 0.099±0.00 0.302±0.00 0.279±0.14 0.037±0.02 0.435±0.07 0.145±0.00 0.241±0.04 0.062±0.00 N/A
ENSMUST00000101619 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000115070 N/A N/A N/A N/A N/A N/A N/A 0.055±0.00 0.083±0.00 N/A N/A 0.047±0.00 N/A 0.097±0.00
ENSMUST00000128393 N/A N/A 0.059±0.00 N/A N/A N/A N/A 0.177±0.00 N/A N/A N/A N/A 0.075±0.00 0.195±0.04
ENSMUST00000129855 N/A N/A N/A N/A N/A N/A 0.019±0.00 N/A 0.003±0.00 N/A 0.014±0.00 0.018±0.01 N/A N/A
ENSMUST00000153948 N/A N/A N/A N/A N/A N/A N/A N/A 0.121±0.01 N/A N/A N/A 0.196±0.06 N/A
ENSMUST00000189753 N/A 0.191±0.11 N/A N/A 0.991±0.33 N/A 0.096±0.00 0.100±0.00 0.132±0.08 0.317±0.07 N/A 0.257±0.16 0.018±0.00 0.078±0.05
ENSMUSG00000016150 ENSMUST00000016294 0.003±0.00 0.063±0.00 N/A 0.811±0.00 0.023±0.01 N/A 0.006±0.00 N/A 0.004±0.00 0.018±0.00 N/A 0.047±0.00 0.005±0.00 0.005±0.00
ENSMUST00000115058 0.241±0.00 N/A 0.003±0.00 N/A 0.032±0.01 0.009±0.00 0.010±0.00 N/A 0.004±0.00 N/A N/A 0.006±0.00 0.003±0.00 N/A
ENSMUST00000115059 N/A N/A N/A 0.995±0.00 N/A 0.009±0.00 N/A N/A 0.001±0.00 N/A N/A 0.010±0.00 0.001±0.00 N/A
ENSMUST00000125231 0.642±0.05 N/A 0.025±0.00 N/A N/A 0.048±0.00 0.041±0.02 0.053±0.00 0.027±0.01 N/A N/A 0.196±0.10 N/A N/A
ENSMUST00000126161 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154433 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.021±0.01
ENSMUSG00000025862 ENSMUST00000069619 5.042±0.73 3.241±1.13 7.329±1.92 5.015±3.12 4.712±1.37 2.865±0.78 1.196±0.61 2.840±0.84 7.990±4.86 7.892±1.13 5.973±0.46 6.244±2.22 4.496±0.80 1.244±0.59
ENSMUST00000115072 2.206±0.00 N/A N/A 3.542±0.00 1.473±0.00 0.625±0.00 0.583±0.00 0.952±0.29 N/A 2.247±0.00 N/A 2.890±1.43 0.989±0.10 0.721±0.00
ENSMUST00000115073 0.861±0.00 0.749±0.00 2.404±0.79 3.727±0.11 1.331±0.00 0.833±0.00 N/A N/A 4.019±1.12 N/A 1.625±0.26 2.007±1.16 1.781±0.00 1.038±0.15
ENSMUST00000123245 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000127618 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000128799 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136323 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141414 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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