C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: LON peptidase N-terminal domain and ring finger 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000016383 Lonrf3-001 ENSMUSG00000016239 10090 + X:36328353-36362341 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000016383
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000016383 0.355±0.16 1.139±0.62 1.436±0.00 0.241±0.06 1.272±0.30 0.102±0.02 1.057±0.24 0.761±0.34 1.117±0.32 0.211±0.15 1.332±0.69 8.162±4.18 3.489±0.48

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00071C CIL_00071C_0002 CGP X:36195904-36362341

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0004176 IEA ATP-dependent peptidase activity
GO:0005575 ND cellular_component
GO:0006200 IEA ATP catabolic process
GO:0006508 IEA proteolysis
GO:0008150 ND biological_process
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000304778 LONRF3-201 protein_coding Homo_sapiens 0 1356
ENST00000371628 LONRF3-005 protein_coding Homo_sapiens 0 2113
ENST00000422289 LONRF3-202 protein_coding Homo_sapiens 0 1356
ENST00000439603 LONRF3-002 protein_coding Homo_sapiens 0 1304
ENST00000472173 LONRF3-004 processed_transcript Homo_sapiens 0 676
ENST00000481285 LONRF3-003 nonsense_mediated_decay Homo_sapiens 0 1489

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