C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: negative elongation factor complex member C/D, Th1l
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000016253 Nelfcd 10090 + 2:174415804-174427502 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000016397 Nelfcd-002 174415851-174427502 protein_coding
  ENSMUST00000109075 Nelfcd-001 174415804-174427502 protein_coding
  ENSMUST00000129716 Nelfcd-003 174415880-174422672 processed_transcript
  ENSMUST00000137986 Nelfcd-006 174426362-174427397 retained_intron
  ENSMUST00000139390 Nelfcd-005 174424680-174425948 retained_intron
  ENSMUST00000143683 Nelfcd-004 174423392-174424913 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000109075
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000109075 19.962±0.90 24.891±1.29 14.438±2.36 25.969±6.98 15.582±3.31 17.714±0.47 13.181±1.04 14.707±0.58 23.735±11.68 14.664±0.75 10.178±0.52 19.867±2.67 30.586±9.30 8.790±2.18

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002U2 CIL_0002U2_0002 CGP 2:174415804-174439039

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0006351 IEA transcription, DNA-templated
GO:0016020 IEA membrane
GO:0032021 ISS NELF complex
GO:0045892 IEA negative regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000021097 nelfcd negative elongation factor complex member C/D protein_coding Danio_rerio
ENSG00000101158 NELFCD negative elongation factor complex member C/D protein_coding Homo_sapiens

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