C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: mitochondrial translational initiation factor 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000016510 Mtif3 10090 - 5:146951573-146963800 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000016654 Mtif3-001 146954520-146963787 protein_coding
  ENSMUST00000066675 Mtif3-002 146951573-146963785 protein_coding
  ENSMUST00000110564 Mtif3-004 146955367-146963749 protein_coding
  ENSMUST00000110566 Mtif3-003 146955367-146963797 protein_coding
  ENSMUST00000125217 Mtif3-006 146958937-146963743 protein_coding
  ENSMUST00000140526 Mtif3-005 146958948-146963800 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000016654ENSMUST00000066675ENSMUST00000110566
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000016654 5.610±0.25 4.818±0.52 4.103±1.44 7.834±3.26 13.928±2.60 3.880±0.95 11.860±0.98 6.323±0.96 6.331±1.48 2.527±0.42 9.416±3.37 3.864±0.60 4.159±0.41
ENSMUST00000066675 1.186±0.20 1.178±0.05 1.398±0.00 0.869±0.02 2.248±0.00 0.801±0.22 2.128±0.12 1.100±0.17 0.977±0.01 1.075±0.21 1.987±0.00 1.378±0.36 0.417±0.09
ENSMUST00000110566 N/A 4.104±0.00 14.693±0.00 N/A N/A 2.660±0.13 N/A 4.484±0.46 N/A 4.739±0.94 16.084±10.16 14.366±8.33 7.926±8.24

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004MH CIL_0004MH_0002 CGP 5:146845071-146955614
CIL_0008CO CIL_0008CO_0002 VISTA 5:146855041-147456530
CIL_00082E CIL_00082E_0002 VISTA 5:146922660-147524221
CIL_0000G7 CIL_0000G7_0003 CGP 5:146948657-146963800
CIL_0004M9 CIL_0004M9_0002 CGP 5:146951573-147076586

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001732 ISS formation of cytoplasmic translation initiation complex
GO:0003743 IEA translation initiation factor activity
GO:0005739 IC mitochondrion
GO:0006446 ISS regulation of translational initiation
GO:0008135 ISS translation factor activity, nucleic acid binding
GO:0032790 ISS ribosome disassembly
GO:0043024 ISS ribosomal small subunit binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000039649 mtif3 mitochondrial translational initiation factor 3 protein_coding Danio_rerio
ENSG00000122033 MTIF3 mitochondrial translational initiation factor 3 protein_coding Homo_sapiens

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