C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000G7_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000030267-ENSDARG00000039649 CGP 7955 5:70975776-70997235
GeneTranscriptPositionBiotype
ENSDARG00000030267 (gtf3aa)
general transcription factor IIIAa 		ENSDART00000049331 (gtf3aa-001) 70975776-70988675 protein_coding
ENSDART00000131665 (gtf3aa-002) 70975790-70986031 nonsense_mediated_decay
ENSDARG00000039649 (mtif3)
mitochondrial translational initiation factor 3 		ENSDART00000057956 (mtif3-201) 70990134-70994647 protein_coding
ENSDART00000144879 (mtif3-001) 70990119-70997235 protein_coding
CIL_0000G7_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000122034-ENSG00000122033 CGP 9606 13:27424544-27450591
GeneTranscriptPositionBiotype
ENSG00000122034 (GTF3A)
general transcription factor IIIA 		ENST00000381140 (GTF3A-001) 27424544-27435688 protein_coding
ENST00000419181 (GTF3A-002) 27424662-27435688 nonsense_mediated_decay
ENST00000435781 (GTF3A-004) 27424638-27434169 nonsense_mediated_decay
ENST00000438571 (GTF3A-005) 27424676-27432745 nonsense_mediated_decay
ENST00000439403 (GTF3A-201) 27424544-27435686 protein_coding
ENST00000466776 (GTF3A-006) 27424766-27434150 processed_transcript
ENST00000470606 (GTF3A-003) 27425411-27435688 processed_transcript
ENST00000482655 (GTF3A-009) 27434657-27435823 retained_intron
ENST00000493903 (GTF3A-008) 27429213-27435034 processed_transcript
CIL_0000G7_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000016503-ENSMUSG00000016510 CGP 10090 5:146948657-146963800
GeneTranscriptPositionBiotype
ENSMUSG00000016510 (Mtif3)
mitochondrial translational initiation factor 3 		ENSMUST00000016654 (Mtif3-001) 146954520-146963787 protein_coding
ENSMUST00000066675 (Mtif3-002) 146951573-146963785 protein_coding
ENSMUST00000110564 (Mtif3-004) 146955367-146963749 protein_coding
ENSMUST00000110566 (Mtif3-003) 146955367-146963797 protein_coding
ENSMUST00000125217 (Mtif3-006) 146958937-146963743 protein_coding
ENSMUST00000140526 (Mtif3-005) 146958948-146963800 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000G7_0001ENSDARG00000030267ENSDART00000049331ENSDART00000131665ENSDARG00000039649ENSDART00000057956ENSDART00000144879CIL_0000G7_0002ENSG00000122034ENST00000381140ENST00000419181ENST00000435781ENST00000438571ENST00000439403ENST00000466776ENST00000470606ENST00000482655ENST00000493903CIL_0000G7_0003ENSMUSG00000016510ENSMUST00000016654ENSMUST00000066675ENSMUST00000110564ENSMUST00000110566ENSMUST00000125217ENSMUST00000140526
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000G7_0001ENSDARG00000030267ENSDART00000049331ENSDART00000131665ENSDARG00000039649ENSDART00000057956ENSDART00000144879CIL_0000G7_0002ENSG00000122034ENST00000381140ENST00000419181ENST00000439403ENST00000466776CIL_0000G7_0003ENSMUSG00000016510ENSMUST00000016654ENSMUST00000066675ENSMUST00000110566
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000030267 ENSDART00000049331 N/A N/A N/A 2.842±0.63 N/A N/A 1.563±0.87 6.049±0.00 2.641±0.00 N/A 1.288±0.00 N/A N/A N/A
ENSDART00000131665 N/A N/A N/A N/A N/A N/A 0.510±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000039649 ENSDART00000057956 N/A N/A N/A 2.209±0.00 N/A N/A 2.627±0.00 6.291±0.00 N/A N/A 0.995±0.00 N/A N/A N/A
ENSDART00000144879 N/A N/A N/A 2.695±0.00 N/A N/A 5.785±0.98 1.761±0.00 1.041±0.00 N/A 2.747±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000122034 ENST00000381140 N/A N/A N/A N/A N/A N/A 3.873±0.00 N/A 3.324±0.00 N/A 7.950±0.00 23.694±6.70 27.980±0.00 N/A
ENST00000419181 N/A N/A N/A N/A N/A N/A N/A N/A 2.777±0.00 11.636±0.00 27.793±0.00 N/A 9.292±0.00 20.524±0.00
ENST00000435781 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000438571 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000439403 48.243±0.00 97.436±0.00 1.414±0.00 23.544±11.89 43.829±36.05 25.894±21.43 39.133±33.46 29.792±14.64 67.188±0.00 21.619±17.25 54.397±0.00 89.422±71.36 21.068±6.00 72.289±0.00
ENST00000466776 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 268.332±0.00 40.452±0.00 N/A
ENST00000470606 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482655 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493903 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000016510 ENSMUST00000016654 5.610±0.25 N/A 4.818±0.52 4.103±1.44 7.834±3.26 13.928±2.60 3.880±0.95 11.860±0.98 6.323±0.96 6.331±1.48 2.527±0.42 9.416±3.37 3.864±0.60 4.159±0.41
ENSMUST00000066675 1.186±0.20 N/A 1.178±0.05 1.398±0.00 0.869±0.02 2.248±0.00 0.801±0.22 2.128±0.12 1.100±0.17 0.977±0.01 1.075±0.21 1.987±0.00 1.378±0.36 0.417±0.09
ENSMUST00000110564 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000110566 N/A N/A 4.104±0.00 14.693±0.00 N/A N/A 2.660±0.13 N/A 4.484±0.46 N/A 4.739±0.94 16.084±10.16 14.366±8.33 7.926±8.24
ENSMUST00000125217 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140526 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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