C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0005H5_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000037042-ENSG00000068137 CGP 9606 17:42659305-42676994
GeneTranscriptPositionBiotype
ENSG00000037042 (TUBG2)
tubulin, gamma 2
ENST00000251412 (TUBG2-001) 42659305-42667006 protein_coding
ENST00000588870 (TUBG2-002) 42659307-42666822 retained_intron
ENST00000590396 (TUBG2-003) 42660260-42661391 retained_intron
ENSG00000068137 (PLEKHH3)
pleckstrin homology domain containing, family H (with MyTH4 domain) member 3
ENST00000293349 (PLEKHH3-003) 42667944-42676994 protein_coding
ENST00000456950 (PLEKHH3-004) 42667917-42676090 processed_transcript
ENST00000587627 (PLEKHH3-008) 42673650-42676992 protein_coding
ENST00000591022 (PLEKHH3-001) 42667914-42676951 protein_coding
ENST00000591196 (PLEKHH3-005) 42667914-42676633 nonsense_mediated_decay
ENST00000591476 (PLEKHH3-010) 42667914-42669698 retained_intron
ENST00000591490 (PLEKHH3-002) 42667917-42676897 retained_intron
ENST00000591544 (PLEKHH3-007) 42673399-42676061 processed_transcript
ENST00000592974 (PLEKHH3-009) 42673170-42674400 processed_transcript
CIL_0005H5_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000045007-ENSMUSG00000035172 CGP 10090 11:101155907-101171351
GeneTranscriptPositionBiotype
ENSMUSG00000017167 (Cntnap1)
contactin associated protein-like 1
ENSMUST00000103109 (Cntnap1-001) 101176041-101190724 protein_coding
ENSMUST00000138942 (Cntnap1-002) 101170523-101178316 processed_transcript
ENSMUSG00000035172 (Plekhh3)
pleckstrin homology domain containing, family H (with MyTH4 domain) member 3
ENSMUST00000043397 (Plekhh3-001) 101162679-101171351 protein_coding
ENSMUST00000123864 (Plekhh3-004) 101167474-101170354 protein_coding
ENSMUST00000129895 (Plekhh3-003) 101162679-101170955 nonsense_mediated_decay
ENSMUST00000139200 (Plekhh3-002) 101162679-101165620 nonsense_mediated_decay
ENSMUST00000156320 (Plekhh3-005) 101164167-101165324 processed_transcript
ENSMUST00000164474 (Plekhh3-201) 101162682-101171317 protein_coding
ENSMUSG00000045007 (Tubg2)
tubulin, gamma 2
ENSMUST00000043654 (Tubg2-001) 101155907-101161787 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005H5_0001ENSG00000037042ENST00000251412ENST00000588870ENST00000590396ENSG00000068137ENST00000293349ENST00000456950ENST00000587627ENST00000591022ENST00000591196ENST00000591476ENST00000591490ENST00000591544ENST00000592974CIL_0005H5_0002ENSMUSG00000017167ENSMUST00000103109ENSMUST00000138942ENSMUSG00000035172ENSMUST00000043397ENSMUST00000123864ENSMUST00000129895ENSMUST00000139200ENSMUST00000156320ENSMUST00000164474ENSMUSG00000045007ENSMUST00000043654
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005H5_0001ENSG00000037042ENST00000251412ENST00000588870ENST00000590396ENSG00000068137ENST00000293349ENST00000587627ENST00000591022ENST00000591196ENST00000591476ENST00000591490CIL_0005H5_0002ENSMUSG00000017167ENSMUST00000103109ENSMUST00000138942ENSMUSG00000035172ENSMUST00000043397ENSMUST00000123864ENSMUST00000129895ENSMUST00000139200ENSMUST00000164474ENSMUSG00000045007ENSMUST00000043654
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000037042 ENST00000251412 7.583±0.00 6.485±0.00 N/A 32.726±18.50 9.033±7.78 9.166±0.00 2.333±1.70 6.363±6.15 2.078±0.16 4.251±2.97 2.013±0.00 9.077±1.41 6.615±0.74 8.769±2.30
ENST00000588870 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.225±0.00 2.169±0.00 N/A 0.882±0.00
ENST00000590396 N/A 1.827±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.127±0.00 N/A 0.999±0.00
ENSG00000068137 ENST00000293349 2.951±0.00 7.315±0.00 0.867±0.00 0.977±0.81 6.376±5.93 1.455±1.11 3.329±0.00 5.422±0.00 1.847±0.36 4.749±0.00 1.571±1.03 14.897±11.70 3.535±1.75 6.266±4.18
ENST00000456950 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587627 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.107±0.00 N/A N/A N/A
ENST00000591022 N/A N/A N/A N/A N/A 0.262±0.00 N/A 0.822±0.00 N/A 0.163±0.00 N/A 20.823±0.00 2.432±0.88 3.500±0.00
ENST00000591196 0.846±0.00 N/A N/A 0.988±0.00 3.448±0.00 3.412±0.00 N/A 1.898±0.00 N/A 1.709±0.00 1.209±0.00 6.970±0.00 1.527±0.00 3.260±0.00
ENST00000591476 N/A N/A N/A 0.290±0.00 N/A N/A N/A N/A N/A 0.825±0.00 N/A N/A N/A N/A
ENST00000591490 0.540±0.00 1.118±0.00 N/A N/A N/A 0.609±0.48 N/A N/A 0.369±0.02 0.312±0.00 N/A 1.807±1.07 N/A 1.476±0.00
ENST00000591544 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592974 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000017167 ENSMUST00000103109 3.189±0.52 5.269±0.34 3.247±1.14 18.932±24.95 2.646±0.18 4.415±0.36 1.249±0.04 1.395±0.13 0.330±0.17 1.268±0.27 0.571±0.00 6.087±1.31 0.385±0.21 0.139±0.08
ENSMUST00000138942 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.279±0.00
ENSMUSG00000035172 ENSMUST00000043397 5.212±0.37 9.483±2.54 4.162±0.98 1.454±0.11 4.880±0.91 6.294±1.37 2.191±0.75 2.883±0.95 0.862±0.51 4.619±1.03 3.191±1.14 7.972±2.13 2.267±1.59 0.523±0.00
ENSMUST00000123864 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.566±0.00
ENSMUST00000129895 3.562±0.61 N/A 3.227±0.00 N/A N/A N/A 1.749±0.00 N/A N/A N/A N/A 10.278±0.00 2.206±0.06 N/A
ENSMUST00000139200 N/A N/A N/A N/A 6.223±0.00 N/A 3.221±0.22 2.796±0.64 0.790±0.45 N/A N/A N/A N/A 0.482±0.04
ENSMUST00000156320 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000164474 5.613±1.27 13.022±1.16 7.096±0.59 1.593±0.00 9.393±0.84 5.715±0.75 3.323±0.66 2.619±0.78 0.964±0.64 5.008±2.33 5.156±1.54 11.841±2.78 2.308±0.94 0.436±0.18
ENSMUSG00000045007 ENSMUST00000043654 0.760±0.40 1.765±0.12 1.794±0.80 15.161±8.20 0.656±0.43 1.341±0.20 0.506±0.10 0.431±0.14 0.098±0.04 0.786±0.28 0.875±0.18 2.708±0.71 0.607±0.50 0.437±0.15

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