C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: WD repeat and SOCS box-containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000017821 Wsb1-001 ENSMUSG00000017677 10090 - 11:79239372-79254671 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000017821
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000017821 13.508±3.07 9.187±4.08 17.366±6.71 75.005±30.80 9.366±2.99 20.369±4.22 2.864±0.82 9.950±4.75 8.892±5.03 18.637±1.72 2.342±0.88 11.668±2.98 12.880±4.11 4.269±1.45

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007SM CIL_0007SM_0002 VISTA 11:78750979-79355443
CIL_0001AY CIL_0001AY_0002 CGP 11:79013440-79254671

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005622 IEA intracellular
GO:0008150 ND biological_process
GO:0016567 IEA protein ubiquitination
GO:0035556 IEA intracellular signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000008854 wsb1-001 protein_coding Danio_rerio 0 394
ENST00000262394 WSB1-001 protein_coding Homo_sapiens 0 1930
ENST00000348811 WSB1-002 protein_coding Homo_sapiens 0 1208
ENST00000427287 WSB1-005 protein_coding Homo_sapiens 0 741
ENST00000467843 WSB1-003 retained_intron Homo_sapiens 0 1035
ENST00000487603 WSB1-004 retained_intron Homo_sapiens 0 643
ENST00000578312 WSB1-008 processed_transcript Homo_sapiens 2.00386e-43 180
ENST00000579733 WSB1-006 protein_coding Homo_sapiens 5.00264e-43 180
ENST00000581089 WSB1-014 retained_intron Homo_sapiens 5.04467e-44 182
ENST00000581185 WSB1-007 protein_coding Homo_sapiens 0 1035
ENST00000581440 WSB1-009 protein_coding Homo_sapiens 0 784
ENST00000582208 WSB1-015 nonsense_mediated_decay Homo_sapiens 0 390
ENST00000583096 WSB1-017 retained_intron Homo_sapiens 0 1016
ENST00000583193 WSB1-012 protein_coding Homo_sapiens 2.00386e-43 180
ENST00000583742 WSB1-010 protein_coding Homo_sapiens 2.00386e-43 180
ENST00000583786 WSB1-013 processed_transcript Homo_sapiens 0 359
ENST00000584114 WSB1-016 protein_coding Homo_sapiens 0 521
ENST00000584354 WSB1-011 retained_intron Homo_sapiens 0 392

Loading