C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: WD repeat and SOCS box-containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000145772 Wsb1-007 ENSMUSG00000017677 10090 - 11:79243288-79254669 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryTestisENSMUST00000145772
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Testis
ENSMUST00000145772 9.871±0.00 50.700±11.63 111.532±47.33 24.953±9.83 36.778±10.65 2.599±0.00 22.500±11.97 8.334±0.94 30.644±5.25 49.848±9.70 4.025±0.72

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007SM CIL_0007SM_0002 VISTA 11:78750979-79355443
CIL_0001AY CIL_0001AY_0002 CGP 11:79013440-79254671

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000262394 WSB1-001 protein_coding Homo_sapiens 0 392
ENST00000348811 WSB1-002 protein_coding Homo_sapiens 5.00264e-43 180
ENST00000427287 WSB1-005 protein_coding Homo_sapiens 0 715
ENST00000467843 WSB1-003 retained_intron Homo_sapiens 0 739
ENST00000487603 WSB1-004 retained_intron Homo_sapiens 0 739
ENST00000578312 WSB1-008 processed_transcript Homo_sapiens 2.00386e-43 180
ENST00000579733 WSB1-006 protein_coding Homo_sapiens 0 739
ENST00000581089 WSB1-014 retained_intron Homo_sapiens 5.04467e-44 182
ENST00000581185 WSB1-007 protein_coding Homo_sapiens 0 392
ENST00000581440 WSB1-009 protein_coding Homo_sapiens 0 296
ENST00000582208 WSB1-015 nonsense_mediated_decay Homo_sapiens 0 665
ENST00000583193 WSB1-012 protein_coding Homo_sapiens 0 381
ENST00000583742 WSB1-010 protein_coding Homo_sapiens 2.00386e-43 180
ENST00000583786 WSB1-013 processed_transcript Homo_sapiens 0 359
ENST00000584114 WSB1-016 protein_coding Homo_sapiens 1e-29 134
ENST00000584354 WSB1-011 retained_intron Homo_sapiens 0 396

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