C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: arylformamidase
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000017718 Afmid 10090 + 11:117825924-117839908 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000073388 Afmid-001 117825924-117839908 protein_coding
  ENSMUST00000131268 Afmid-007 117832273-117835524 retained_intron
  ENSMUST00000139945 Afmid-005 117832104-117835417 retained_intron
  ENSMUST00000148016 Afmid-003 117832230-117837231 retained_intron
  ENSMUST00000149668 Afmid-002 117825974-117837234 protein_coding
  ENSMUST00000153850 Afmid-006 117825981-117832650 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastKidneyLiverOvaryTestisENSMUST00000073388
Transcript ID Bladder Brain Breast Kidney Liver Ovary Testis
ENSMUST00000073388 6.842±0.74 0.575±0.00 4.297±0.00 37.076±2.27 56.470±24.69 2.143±0.00 2.803±0.19

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007YS CIL_0007YS_0002 VISTA 11:117565410-118167678
CIL_0003U7 CIL_0003U7_0003 CGP 11:117815526-117839908
CIL_0006JS CIL_0006JS_0002 CGP 11:117825924-117855743

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004061 IEA arylformamidase activity
GO:0005634 IEA nucleus
GO:0005737 IDA cytoplasm
GO:0005829 TAS cytosol
GO:0019441 IEA tryptophan catabolic process to kynurenine
GO:0034354 IEA 'de novo' NAD biosynthetic process from tryptophan

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000030548 afmid arylformamidase protein_coding Danio_rerio
ENSDARG00000086180 CU929356.4 Kynurenine formamidase protein_coding Danio_rerio
ENSG00000183077 AFMID arylformamidase protein_coding Homo_sapiens

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