C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006JS_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000183077-ENSG00000089685 CGP 9606 17:78187317-78225636
GeneTranscriptPositionBiotype
ENSG00000089685 (BIRC5)
baculoviral IAP repeat containing 5 		ENST00000301633 (BIRC5-004) 78214186-78225636 protein_coding
ENST00000350051 (BIRC5-001) 78214198-78225636 protein_coding
ENST00000374948 (BIRC5-002) 78214264-78225636 protein_coding
ENST00000586192 (BIRC5-009) 78214385-78222979 nonsense_mediated_decay
ENST00000587746 (BIRC5-010) 78214385-78222979 protein_coding
ENST00000589892 (BIRC5-012) 78216427-78223856 processed_transcript
ENST00000590449 (BIRC5-003) 78214280-78215099 protein_coding
ENST00000590925 (BIRC5-006) 78214263-78223554 nonsense_mediated_decay
ENST00000591800 (BIRC5-011) 78214385-78222979 nonsense_mediated_decay
ENST00000592115 (BIRC5-008) 78214365-78222979 retained_intron
ENST00000592734 (BIRC5-005) 78214317-78222992 protein_coding
ENSG00000183077 (AFMID)
arylformamidase 		ENST00000327898 (AFMID-001) 78187362-78207701 protein_coding
ENST00000409257 (AFMID-005) 78187317-78207701 protein_coding
ENST00000585419 (AFMID-014) 78202721-78207052 processed_transcript
ENST00000586542 (AFMID-007) 78187364-78205081 protein_coding
ENST00000586731 (AFMID-015) 78187401-78197560 protein_coding
ENST00000587750 (AFMID-011) 78202509-78207202 processed_transcript
ENST00000588199 (AFMID-010) 78187362-78207187 nonsense_mediated_decay
ENST00000588800 (AFMID-004) 78187362-78207240 protein_coding
ENST00000589107 (AFMID-008) 78187362-78204852 nonsense_mediated_decay
ENST00000589256 (AFMID-002) 78187362-78197560 protein_coding
ENST00000589664 (AFMID-012) 78202572-78207405 processed_transcript
ENST00000591256 (AFMID-006) 78187358-78205051 protein_coding
ENST00000591538 (AFMID-013) 78190711-78202734 processed_transcript
ENST00000591952 (AFMID-009) 78187362-78207329 protein_coding
ENST00000592988 (AFMID-003) 78187362-78204039 retained_intron
ENSG00000267624 (RP11-219G17.6)
 ENST00000588528 (RP11-219G17.6-001) 78211618-78211908 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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CIL_0006JS_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000017718-ENSMUSG00000017716 CGP 10090 11:117825924-117855743
GeneTranscriptPositionBiotype
ENSMUSG00000017716 (Birc5)
baculoviral IAP repeat-containing 5 		ENSMUST00000081387 (Birc5-001) 117849251-117855732 protein_coding
ENSMUST00000093906 (Birc5-002) 117849319-117855743 protein_coding
ENSMUSG00000017718 (Afmid)
arylformamidase 		ENSMUST00000073388 (Afmid-001) 117825924-117839908 protein_coding
ENSMUST00000131268 (Afmid-007) 117832273-117835524 retained_intron
ENSMUST00000139945 (Afmid-005) 117832104-117835417 retained_intron
ENSMUST00000148016 (Afmid-003) 117832230-117837231 retained_intron
ENSMUST00000149668 (Afmid-002) 117825974-117837234 protein_coding
ENSMUST00000153850 (Afmid-006) 117825981-117832650 retained_intron
ENSMUSG00000025574 (Tk1)
thymidine kinase 1 		ENSMUST00000026661 (Tk1-001) 117815526-117826092 protein_coding
ENSMUST00000129852 (Tk1-002) 117822458-117825847 retained_intron
ENSMUST00000141939 (Tk1-007) 117815624-117816654 retained_intron
ENSMUST00000150027 (Tk1-005) 117824834-117825817 retained_intron
ENSMUST00000153298 (Tk1-003) 117821718-117825867 retained_intron
ENSMUST00000153872 (Tk1-004) 117815905-117817424 retained_intron
ENSMUST00000154790 (Tk1-006) 117821640-117825837 retained_intron
ENSMUSG00000093485 (Gm20708)
predicted gene 20708 		ENSMUST00000132298 (Gm20708-001) 117809668-117839904 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006JS_0001ENSG00000089685ENST00000301633ENST00000350051ENST00000374948ENST00000586192ENST00000587746ENST00000589892ENST00000590449ENST00000590925ENST00000591800ENST00000592115ENST00000592734ENSG00000183077ENST00000327898ENST00000409257ENST00000585419ENST00000586542ENST00000586731ENST00000587750ENST00000588199ENST00000588800ENST00000589107ENST00000589256ENST00000589664ENST00000591256ENST00000591538ENST00000591952ENST00000592988ENSG00000267624ENST00000588528CIL_0006JS_0002ENSMUSG00000017716ENSMUST00000081387ENSMUST00000093906ENSMUSG00000017718ENSMUST00000073388ENSMUST00000131268ENSMUST00000139945ENSMUST00000148016ENSMUST00000149668ENSMUST00000153850ENSMUSG00000025574ENSMUST00000026661ENSMUST00000129852ENSMUST00000141939ENSMUST00000150027ENSMUST00000153298ENSMUST00000153872ENSMUST00000154790ENSMUSG00000093485ENSMUST00000132298
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006JS_0001ENSG00000089685ENST00000301633ENST00000350051ENST00000374948ENST00000589892ENST00000590925ENST00000592115ENSG00000183077ENST00000327898ENST00000409257ENST00000585419ENST00000586542ENST00000587750ENST00000588199ENST00000588800ENST00000589664ENST00000591256ENST00000591952ENST00000592988ENSG00000267624ENST00000588528CIL_0006JS_0002ENSMUSG00000017716ENSMUST00000081387ENSMUST00000093906ENSMUSG00000017718ENSMUST00000073388ENSMUSG00000025574ENSMUST00000026661ENSMUST00000129852ENSMUSG00000093485ENSMUST00000132298
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000089685 ENST00000301633 N/A 0.292±0.00 0.037±0.00 N/A N/A N/A 0.089±0.00 0.290±0.00 N/A 0.377±0.00 N/A 0.749±0.00 0.966±0.00 N/A
ENST00000350051 0.392±0.00 N/A N/A 0.046±0.00 0.429±0.00 2.168±0.00 N/A 0.170±0.00 0.064±0.00 N/A N/A 5.996±6.20 6.089±2.29 8.475±5.91
ENST00000374948 N/A 0.418±0.00 N/A N/A 0.391±0.00 0.425±0.00 0.055±0.00 N/A N/A N/A 0.047±0.00 1.673±0.00 N/A N/A
ENST00000586192 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587746 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589892 N/A N/A N/A N/A N/A N/A 0.030±0.00 N/A 0.210±0.00 0.350±0.00 N/A 9.049±0.00 3.996±0.00 7.752±0.00
ENST00000590449 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590925 N/A N/A N/A N/A 0.387±0.00 N/A N/A N/A N/A 0.520±0.00 N/A N/A N/A 7.701±0.00
ENST00000591800 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592115 N/A 0.210±0.00 0.179±0.00 0.083±0.01 0.195±0.01 N/A 0.098±0.00 N/A 0.046±0.01 0.575±0.00 0.134±0.12 N/A N/A N/A
ENST00000592734 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000183077 ENST00000327898 0.629±0.00 N/A N/A N/A 1.701±0.00 N/A N/A N/A 12.012±0.00 2.563±0.00 0.238±0.00 3.028±0.00 N/A N/A
ENST00000409257 N/A N/A 5.952±0.00 N/A N/A N/A N/A 10.105±1.19 29.673±0.00 N/A N/A 1.958±0.55 2.601±0.94 N/A
ENST00000585419 N/A N/A N/A N/A N/A 1.419±0.00 N/A 13.219±0.00 N/A N/A N/A N/A N/A N/A
ENST00000586542 N/A N/A N/A N/A N/A 0.597±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586731 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587750 3.797±0.00 6.910±0.00 N/A 8.992±0.00 10.086±0.00 4.600±0.00 3.615±0.00 39.847±0.00 61.811±0.00 6.949±0.00 0.938±0.00 7.999±1.85 5.451±0.00 5.170±0.22
ENST00000588199 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.485±0.00 N/A N/A N/A N/A
ENST00000588800 1.416±0.00 N/A N/A N/A N/A N/A 0.481±0.00 N/A N/A N/A 1.373±0.00 N/A N/A N/A
ENST00000589107 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589256 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589664 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.905±0.00 N/A N/A
ENST00000591256 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.119±0.00 N/A N/A
ENST00000591538 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591952 N/A N/A N/A 8.312±0.00 N/A 2.830±0.00 4.640±0.00 N/A N/A 9.764±0.00 N/A 4.525±0.00 N/A N/A
ENST00000592988 0.558±0.00 N/A N/A N/A N/A N/A N/A N/A 0.518±0.00 N/A 0.234±0.00 1.548±0.87 N/A 1.527±0.58
ENSG00000267624 ENST00000588528 N/A N/A N/A N/A N/A N/A N/A 0.230±0.00 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000017716 ENSMUST00000081387 2.746±2.10 1.956±0.40 1.401±0.30 11.113±8.28 1.371±0.60 7.351±1.42 0.201±0.12 0.556±0.20 80.098±76.69 1.098±0.21 0.111±0.09 12.092±12.32 86.373±85.14 36.568±15.91
ENSMUST00000093906 0.636±0.48 0.398±0.18 0.301±0.06 2.370±2.08 0.362±0.09 1.810±0.89 0.065±0.02 0.129±0.05 6.847±7.45 0.336±0.10 0.023±0.01 2.585±0.93 2.544±2.02 2.186±0.15
ENSMUSG00000017718 ENSMUST00000073388 N/A N/A 6.842±0.74 0.575±0.00 4.297±0.00 N/A N/A 37.076±2.27 56.470±24.69 N/A N/A 2.143±0.00 N/A 2.803±0.19
ENSMUST00000131268 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139945 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148016 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149668 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153850 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000025574 ENSMUST00000026661 17.398±0.43 N/A N/A 19.937±10.38 N/A N/A N/A N/A 88.296±52.51 N/A N/A 13.115±4.18 49.399±6.48 1.000±0.00
ENSMUST00000129852 N/A N/A N/A 0.295±0.00 N/A N/A N/A N/A N/A N/A N/A 1.891±0.00 N/A N/A
ENSMUST00000141939 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150027 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153298 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153872 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154790 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000093485 ENSMUST00000132298 N/A N/A N/A 0.827±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.958±0.00

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