C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 12, member 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000124372 Slc12a5-003 ENSMUSG00000017740 10090 + 2:164960816-164974540 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryTestisENSMUST00000124372
Transcript ID Ovary Testis
ENSMUST00000124372 3.331±0.00 13.401±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006GI CIL_0006GI_0002 CGP 2:164940780-164999727
CIL_0007BH CIL_0007BH_0002 CGP 2:164960816-165034867

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005886 IDA plasma membrane
GO:0006821 IMP chloride transport
GO:0007268 IMP synaptic transmission
GO:0007612 IMP learning
GO:0015379 IMP potassium:chloride symporter activity
GO:0035264 IMP multicellular organism growth
GO:0040040 IMP thermosensory behavior
GO:0042493 IMP response to drug
GO:0043025 IDA neuronal cell body
GO:0043198 IDA dendritic shaft
GO:1902476 IMP chloride transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000243964 SLC12A5-002 protein_coding Homo_sapiens 0 259
ENST00000372315 SLC12A5-001 protein_coding Homo_sapiens 0 259
ENST00000428198 SLC12A5-007 processed_transcript Homo_sapiens 4e-31 137
ENST00000454036 SLC12A5-003 protein_coding Homo_sapiens 0 263
ENST00000539566 SLC12A5-004 nonsense_mediated_decay Homo_sapiens 0 259
ENST00000608944 SLC12A5-005 protein_coding Homo_sapiens 0 261
ENST00000616201 SLC12A5-201 protein_coding Homo_sapiens 0 259
ENST00000616202 SLC12A5-202 protein_coding Homo_sapiens 0 259
ENST00000616933 SLC12A5-203 protein_coding Homo_sapiens 0 259
ENST00000622711 SLC12A5-204 protein_coding Homo_sapiens 0 259

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