C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 12, member 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000099092 Slc12a5-001 ENSMUSG00000017740 10090 + 2:164967983-164999727 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000099092
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000099092 0.791±0.59 3.384±0.72 0.100±0.00 41.110±20.17 0.378±0.00 0.199±0.10 0.096±0.02 0.239±0.10 0.189±0.07 0.438±0.17 0.079±0.05 0.762±0.31 0.094±0.08 2.073±1.60

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006GI CIL_0006GI_0002 CGP 2:164940780-164999727
CIL_0007BH CIL_0007BH_0002 CGP 2:164960816-165034867

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005886 IDA plasma membrane
GO:0006813 IEA potassium ion transport
GO:0006821 IMP chloride transport
GO:0007268 IMP synaptic transmission
GO:0007612 IMP learning
GO:0015379 IMP potassium:chloride symporter activity
GO:0016021 IEA integral component of membrane
GO:0019901 IEA protein kinase binding
GO:0035264 IMP multicellular organism growth
GO:0040040 IMP thermosensory behavior
GO:0042493 IMP response to drug
GO:0043025 IDA neuronal cell body
GO:0043198 IDA dendritic shaft
GO:1902476 IEA chloride transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000243964 SLC12A5-002 protein_coding Homo_sapiens 0 4748
ENST00000264930 SLC12A7-001 protein_coding Homo_sapiens 0 1531
ENST00000372315 SLC12A5-001 protein_coding Homo_sapiens 0 1411
ENST00000454036 SLC12A5-003 protein_coding Homo_sapiens 0 4527
ENST00000513223 SLC12A7-007 protein_coding Homo_sapiens 0 514
ENST00000539566 SLC12A5-004 nonsense_mediated_decay Homo_sapiens 0 874
ENST00000608594 SLC12A5-006 processed_transcript Homo_sapiens 0 285
ENST00000608944 SLC12A5-005 protein_coding Homo_sapiens 0 612
ENST00000611005 SLC12A7-201 protein_coding Homo_sapiens 0 1531
ENST00000616201 SLC12A5-201 protein_coding Homo_sapiens 0 2061
ENST00000616202 SLC12A5-202 protein_coding Homo_sapiens 0 1083
ENST00000616933 SLC12A5-203 protein_coding Homo_sapiens 0 3783
ENST00000622711 SLC12A5-204 protein_coding Homo_sapiens 0 896

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