C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cathepsin A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000017760 Ctsa 10090 + 2:164832873-164841032 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000017904 Ctsa-201 164832873-164841032 protein_coding
  ENSMUST00000103092 Ctsa-001 164832901-164841032 protein_coding
  ENSMUST00000103093 Ctsa-011 164832873-164840019 protein_coding
  ENSMUST00000127650 Ctsa-002 164832926-164835691 protein_coding
  ENSMUST00000128596 Ctsa-008 164834073-164836472 retained_intron
  ENSMUST00000130959 Ctsa-006 164834030-164835193 retained_intron
  ENSMUST00000133077 Ctsa-005 164834030-164837035 retained_intron
  ENSMUST00000133502 Ctsa-015 164832887-164833759 processed_transcript
  ENSMUST00000140213 Ctsa-010 164837182-164837660 retained_intron
  ENSMUST00000143293 Ctsa-007 164834310-164835721 processed_transcript
  ENSMUST00000143780 Ctsa-004 164833815-164837002 protein_coding
  ENSMUST00000144580 Ctsa-017 164834473-164835469 retained_intron
  ENSMUST00000146525 Ctsa-014 164833807-164834421 retained_intron
  ENSMUST00000147883 Ctsa-003 164832926-164833779 processed_transcript
  ENSMUST00000151493 Ctsa-016 164832909-164834062 protein_coding
  ENSMUST00000152721 Ctsa-013 164833858-164836477 protein_coding
  ENSMUST00000155061 Ctsa-012 164833847-164834874 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000103093ENSMUST00000133077ENSMUST00000143780
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000103093 49.934±8.34 52.300±9.14 60.344±1.71 23.199±5.66 63.907±16.31 38.798±10.12 28.702±1.61 99.176±42.49 30.888±11.07 76.445±4.90 9.944±2.49 40.922±15.85 97.232±48.38 2.219±0.72
ENSMUST00000133077 N/A N/A N/A 31.428±0.00 N/A N/A N/A N/A N/A N/A N/A 63.201±0.00 135.280±72.87 N/A
ENSMUST00000143780 N/A 91.733±3.81 N/A N/A N/A 84.658±5.75 N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000RY CIL_0000RY_0002 CGP 2:164826389-164833456
CIL_0006GL CIL_0006GL_0002 CGP 2:164830732-164841032
CIL_0006IQ CIL_0006IQ_0003 CGP 2:164832873-164857711

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004185 IEA serine-type carboxypeptidase activity
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005739 IDA mitochondrion
GO:0005764 IEA lysosome
GO:0006508 IEA proteolysis
GO:0016020 IEA membrane
GO:0043231 IEA intracellular membrane-bounded organelle
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000078382 CTSA (1 of 2) cathepsin A protein_coding Danio_rerio
ENSDARG00000087307 ctsa cathepsin A protein_coding Danio_rerio
ENSG00000064601 CTSA cathepsin A protein_coding Homo_sapiens

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