C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cathepsin A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000103093 Ctsa-011 ENSMUSG00000017760 10090 + 2:164832873-164840019 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000103093
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000103093 49.934±8.34 52.300±9.14 60.344±1.71 23.199±5.66 63.907±16.31 38.798±10.12 28.702±1.61 99.176±42.49 30.888±11.07 76.445±4.90 9.944±2.49 40.922±15.85 97.232±48.38 2.219±0.72

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000RY CIL_0000RY_0002 CGP 2:164826389-164833456
CIL_0006GL CIL_0006GL_0002 CGP 2:164830732-164841032
CIL_0006IQ CIL_0006IQ_0003 CGP 2:164832873-164857711

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004185 IEA serine-type carboxypeptidase activity
GO:0005515 IPI protein binding
GO:0005739 IDA mitochondrion
GO:0005764 IEA lysosome
GO:0006508 IEA proteolysis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000191018 CTSA-004 protein_coding Homo_sapiens 0 1528
ENST00000354880 CTSA-006 protein_coding Homo_sapiens 0 1192
ENST00000372459 CTSA-012 protein_coding Homo_sapiens 0 1528
ENST00000372484 CTSA-001 protein_coding Homo_sapiens 0 1528
ENST00000419493 CTSA-020 protein_coding Homo_sapiens 0 691
ENST00000480961 CTSA-009 retained_intron Homo_sapiens 0 366
ENST00000485627 CTSA-007 retained_intron Homo_sapiens 0 545
ENST00000493522 CTSA-008 retained_intron Homo_sapiens 0 710
ENST00000606066 CTSA-014 retained_intron Homo_sapiens 0 344
ENST00000606394 CTSA-018 nonsense_mediated_decay Homo_sapiens 0 414
ENST00000606782 CTSA-019 retained_intron Homo_sapiens 0 274
ENST00000606788 CTSA-023 nonsense_mediated_decay Homo_sapiens 0 1495
ENST00000607212 CTSA-017 retained_intron Homo_sapiens 0 276
ENST00000607814 CTSA-015 retained_intron Homo_sapiens 0 209

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