C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cathepsin A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000143780 Ctsa-004 ENSMUSG00000017760 10090 + 2:164833815-164837002 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalColonENSMUST00000143780
Transcript ID Adrenal Colon
ENSMUST00000143780 91.733±3.81 84.658±5.75

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000RY CIL_0000RY_0002 CGP 2:164826389-164833456
CIL_0006GL CIL_0006GL_0002 CGP 2:164830732-164841032
CIL_0006IQ CIL_0006IQ_0003 CGP 2:164832873-164857711

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004185 IEA serine-type carboxypeptidase activity
GO:0005515 IPI protein binding
GO:0005739 IDA mitochondrion
GO:0006508 IEA proteolysis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000191018 CTSA-004 protein_coding Homo_sapiens 0 429
ENST00000354880 CTSA-006 protein_coding Homo_sapiens 0 259
ENST00000372459 CTSA-012 protein_coding Homo_sapiens 0 429
ENST00000372484 CTSA-001 protein_coding Homo_sapiens 0 442
ENST00000419493 CTSA-020 protein_coding Homo_sapiens 0 259
ENST00000480961 CTSA-009 retained_intron Homo_sapiens 2e-21 106
ENST00000485627 CTSA-007 retained_intron Homo_sapiens 0 250
ENST00000493522 CTSA-008 retained_intron Homo_sapiens 0 259
ENST00000606066 CTSA-014 retained_intron Homo_sapiens 0 357
ENST00000606394 CTSA-018 nonsense_mediated_decay Homo_sapiens 4e-30 135
ENST00000606782 CTSA-019 retained_intron Homo_sapiens 0.0000000000002 81
ENST00000606788 CTSA-023 nonsense_mediated_decay Homo_sapiens 0 442
ENST00000607212 CTSA-017 retained_intron Homo_sapiens 0 276
ENST00000607814 CTSA-015 retained_intron Homo_sapiens 0 209

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