C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: DEAD (Asp-Glu-Ala-Asp) box polypeptide 27
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000017999 Ddx27 10090 + 2:167015193-167034947 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000018143 Ddx27-001 167015193-167034947 protein_coding
  ENSMUST00000126409 Ddx27-003 167026201-167027862 retained_intron
  ENSMUST00000127468 Ddx27-005 167033847-167034903 retained_intron
  ENSMUST00000138969 Ddx27-004 167027542-167028290 retained_intron
  ENSMUST00000150571 Ddx27-002 167015310-167025813 protein_coding
  ENSMUST00000176066 Ddx27-006 167015310-167024533 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000018143ENSMUST00000176066
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000018143 8.505±4.57 13.005±2.09 8.839±3.10 10.796±1.83 9.540±5.54 8.284±1.23 2.585±0.65 6.498±1.59 15.911±13.74 4.950±2.16 3.581±0.34 12.593±6.85 25.996±14.35 10.784±5.00
ENSMUST00000176066 N/A N/A N/A 7.286±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.801±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001T2 CIL_0001T2_0002 CGP 2:166947549-167034947
CIL_000279 CIL_000279_0002 CGP 2:167015193-167063015

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0005524 IEA ATP binding
GO:0005575 ND cellular_component
GO:0005634 IEA nucleus
GO:0006200 IEA ATP catabolic process
GO:0008026 IEA ATP-dependent helicase activity
GO:0008150 ND biological_process
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000091831 ddx27 DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 protein_coding Danio_rerio
ENSG00000124228 DDX27 DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 protein_coding Homo_sapiens

Loading