C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal RNA processing 7 homolog A (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000166766 Rrp7a-003 ENSMUSG00000018040 10090 - 15:83115848-83117616 nonsense_mediated_decay

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastKidneyLiverOvaryPlacentaTestisENSMUST00000166766
Transcript ID Adrenal Brain Breast Kidney Liver Ovary Placenta Testis
ENSMUST00000166766 48.558±5.97 30.595±2.63 40.061±8.02 39.092±0.00 23.410±0.00 60.183±10.05 133.284±10.29 34.784±2.67

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000357802 RRP7B-001 processed_transcript Homo_sapiens 7.00649e-43 180
ENST00000437211 RRP7B-003 processed_transcript Homo_sapiens 5.00264e-43 180
ENST00000458605 RRP7B-002 processed_transcript Homo_sapiens 7.00649e-43 180
ENST00000566851 RRP7B-005 transcribed_unprocessed_pseudogene Homo_sapiens 3.00018e-42 176

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