C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: peripheral myelin protein 22
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000018217 Pmp22 10090 + 11:63128982-63159547 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000018361 Pmp22-001 63131512-63159547 protein_coding
  ENSMUST00000108700 Pmp22-005 63133068-63158566 protein_coding
  ENSMUST00000108701 Pmp22-003 63132569-63158484 protein_coding
  ENSMUST00000108702 Pmp22-002 63128982-63159546 protein_coding
  ENSMUST00000140648 Pmp22-004 63132803-63134489 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000018361ENSMUST00000108700ENSMUST00000108701ENSMUST00000108702
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000018361 33.204±13.84 32.873±6.15 24.881±7.31 2.279±0.61 20.046±7.24 100.218±29.46 7.948±1.49 6.092±0.57 3.175±3.30 126.134±24.90 9.860±2.50 11.625±6.65 26.316±25.15 1.045±0.46
ENSMUST00000108700 27.538±0.62 18.898±4.74 N/A 2.037±0.86 24.301±5.46 47.755±4.72 5.636±0.05 3.630±0.13 0.553±0.23 45.218±0.00 N/A 15.812±3.96 15.353±0.00 0.809±0.37
ENSMUST00000108701 N/A 18.852±0.00 N/A N/A 23.486±0.00 N/A 6.290±1.09 N/A N/A N/A N/A N/A N/A 0.905±0.22
ENSMUST00000108702 26.260±4.28 14.587±5.57 10.630±2.32 0.501±0.00 29.362±8.77 21.486±6.65 5.549±1.25 3.069±0.63 0.382±0.22 57.542±4.13 9.852±3.29 10.317±2.72 N/A 0.812±0.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008QF CIL_0008QF_0002 VISTA 11:62683404-63286950

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005886 IEA plasma membrane
GO:0005923 IEA tight junction
GO:0007050 IEA cell cycle arrest
GO:0008285 IEA negative regulation of cell proliferation
GO:0010977 IEA negative regulation of neuron projection development
GO:0030154 IEA cell differentiation
GO:0032288 IMP myelin assembly
GO:0042552 IEA myelination
GO:0043218 IEA compact myelin

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000060457 pmp22b peripheral myelin protein 22b protein_coding Danio_rerio
ENSG00000109099 PMP22 peripheral myelin protein 22 protein_coding Homo_sapiens

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