C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: peripheral myelin protein 22
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000109099 PMP22 9606 - 17:15229777-15265326 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000312280 PMP22-002 15229778-15265307 protein_coding
  ENST00000395936 PMP22-003 15230797-15262541 protein_coding
  ENST00000395938 PMP22-001 15229778-15262589 protein_coding
  ENST00000426385 PMP22-008 15239341-15262516 protein_coding
  ENST00000471150 PMP22-005 15260280-15265308 retained_intron
  ENST00000494511 PMP22-004 15230516-15265319 protein_coding
  ENST00000580497 PMP22-007 15258737-15260768 retained_intron
  ENST00000580584 PMP22-006 15231067-15265326 protein_coding
  ENST00000612492 PMP22-201 15229777-15262589 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000312280ENST00000395936ENST00000395938ENST00000494511ENST00000612492
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000312280 N/A N/A N/A 11.639±0.00 25.594±0.00 2.142±0.00 13.306±10.78 N/A 4.535±0.00 13.518±9.96 N/A 12.127±0.00 N/A 1.395±0.00
ENST00000395936 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.228±0.00 31.460±0.00 4.079±0.00
ENST00000395938 110.855±0.00 52.693±0.00 N/A 49.102±30.91 30.812±16.32 104.830±0.00 20.199±16.62 13.847±12.76 9.155±4.34 49.516±44.00 67.701±31.62 29.517±23.61 72.047±24.81 26.424±20.27
ENST00000494511 N/A N/A 1.401±0.00 27.934±0.00 10.054±0.00 N/A N/A N/A 10.242±0.00 6.640±0.00 N/A N/A N/A N/A
ENST00000612492 N/A N/A N/A N/A N/A 7.539±0.00 N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005Y3 CIL_0005Y3_0002 CGP 17:14301083-15265326
CIL_0008QF CIL_0008QF_0001 VISTA 17:15144744-15748248
CIL_0005Y9 CIL_0005Y9_0002 CGP 17:15229777-15341641

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005886 IEA plasma membrane
GO:0005923 IEA tight junction
GO:0007268 TAS synaptic transmission
GO:0007422 TAS peripheral nervous system development
GO:0008219 IEA cell death
GO:0008285 IEA negative regulation of cell proliferation
GO:0010977 IEA negative regulation of neuron projection development
GO:0016021 IEA integral component of membrane
GO:0030154 IEA cell differentiation
GO:0032288 IEA myelin assembly
GO:0042552 IEA myelination
GO:0043218 IEA compact myelin

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000060457 pmp22b peripheral myelin protein 22b protein_coding Danio_rerio
ENSMUSG00000018217 Pmp22 peripheral myelin protein 22 protein_coding Mus_musculus

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