C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: peripheral myelin protein 22
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000108702 Pmp22-002 ENSMUSG00000018217 10090 + 11:63128982-63159546 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENSMUST00000108702
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENSMUST00000108702 26.260±4.28 14.587±5.57 10.630±2.32 0.501±0.00 29.362±8.77 21.486±6.65 5.549±1.25 3.069±0.63 0.382±0.22 57.542±4.13 9.852±3.29 10.317±2.72 0.812±0.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008QF CIL_0008QF_0002 VISTA 11:62683404-63286950

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005886 IEA plasma membrane
GO:0005923 IEA tight junction
GO:0007050 IEA cell cycle arrest
GO:0008285 IEA negative regulation of cell proliferation
GO:0010977 IEA negative regulation of neuron projection development
GO:0030154 IEA cell differentiation
GO:0032288 IMP myelin assembly
GO:0042552 IEA myelination
GO:0043218 IEA compact myelin

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000085201 pmp22b-001 protein_coding Danio_rerio 3e-20 104
ENST00000312280 PMP22-002 protein_coding Homo_sapiens 0 1395
ENST00000395936 PMP22-003 protein_coding Homo_sapiens 0 335
ENST00000395938 PMP22-001 protein_coding Homo_sapiens 0 1380
ENST00000426385 PMP22-008 protein_coding Homo_sapiens 0 339
ENST00000494511 PMP22-004 protein_coding Homo_sapiens 0 697
ENST00000580584 PMP22-006 protein_coding Homo_sapiens 0 294
ENST00000612492 PMP22-201 protein_coding Homo_sapiens 0 1380

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