C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: peripheral myelin protein 22
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000018361 Pmp22-001 ENSMUSG00000018217 10090 + 11:63131512-63159547 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000018361
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000018361 33.204±13.84 32.873±6.15 24.881±7.31 2.279±0.61 20.046±7.24 100.218±29.46 7.948±1.49 6.092±0.57 3.175±3.30 126.134±24.90 9.860±2.50 11.625±6.65 26.316±25.15 1.045±0.46

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008QF CIL_0008QF_0002 VISTA 11:62683404-63286950

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005886 IEA plasma membrane
GO:0007050 IEA cell cycle arrest
GO:0032288 IMP myelin assembly

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000085201 pmp22b-001 protein_coding Danio_rerio 3e-20 104
ENST00000312280 PMP22-002 protein_coding Homo_sapiens 0 1382
ENST00000395936 PMP22-003 protein_coding Homo_sapiens 0 335
ENST00000395938 PMP22-001 protein_coding Homo_sapiens 0 1417
ENST00000426385 PMP22-008 protein_coding Homo_sapiens 0 339
ENST00000494511 PMP22-004 protein_coding Homo_sapiens 0 697
ENST00000580584 PMP22-006 protein_coding Homo_sapiens 0 294
ENST00000612492 PMP22-201 protein_coding Homo_sapiens 0 1426

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