C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger with KRAB and SCAN domains 6
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000018347 Zkscan6 10090 + 11:65807175-65829239 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000018491 Zkscan6-001 65807244-65829239 protein_coding
  ENSMUST00000071465 Zkscan6-002 65807175-65829238 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000018491ENSMUST00000071465
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000018491 N/A 1.400±0.00 N/A N/A N/A N/A 0.130±0.00 0.261±0.00 0.321±0.00 0.349±0.00 N/A 1.373±0.69 1.111±0.35 1.729±0.73
ENSMUST00000071465 1.976±0.65 1.795±0.63 2.994±0.69 3.677±0.63 1.874±0.60 3.016±0.42 0.707±0.27 1.532±0.26 1.806±0.67 1.618±0.46 0.916±0.26 3.470±1.73 2.810±1.05 4.422±0.55

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008WK CIL_0008WK_0002 VISTA 11:65348906-65951643

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000981 IBA sequence-specific DNA binding RNA polymerase II transcription factor activity
GO:0003677 IEA DNA binding
GO:0005634 IBA nucleus
GO:0006357 IBA regulation of transcription from RNA polymerase II promoter
GO:0006366 IBA transcription from RNA polymerase II promoter
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000154957 ZNF18 zinc finger protein 18 protein_coding Homo_sapiens

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