C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008WK_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
mm85 VISTA 9606 17:11924684-12528146
GeneTranscriptPositionBiotype
ENSG00000007174 (DNAH9)
dynein, axonemal, heavy chain 9 		ENST00000262442 (DNAH9-001) 11598431-11969748 protein_coding
ENST00000396001 (DNAH9-002) 11882904-11969748 processed_transcript
ENST00000454412 (DNAH9-003) 11598499-11969746 protein_coding
ENST00000578834 (DNAH9-010) 11853192-11869195 processed_transcript
ENST00000579406 (DNAH9-005) 11598472-11630514 processed_transcript
ENST00000579602 (DNAH9-006) 11610517-11612834 protein_coding
ENST00000579703 (DNAH9-012) 11854054-11880200 protein_coding
ENST00000579813 (DNAH9-015) 11611762-11612836 protein_coding
ENST00000579828 (DNAH9-004) 11598470-11612833 protein_coding
ENST00000580255 (DNAH9-008) 11873430-11881372 processed_transcript
ENST00000581682 (DNAH9-011) 11884334-11925461 processed_transcript
ENST00000583192 (DNAH9-016) 11704200-11705493 retained_intron
ENST00000584663 (DNAH9-017) 11723109-11727993 processed_transcript
ENST00000585197 (DNAH9-014) 11617400-11619934 retained_intron
ENST00000608377 (DNAH9-201) 11882902-11969748 protein_coding
ENSG00000065559 (MAP2K4)
mitogen-activated protein kinase kinase 4 		ENST00000353533 (MAP2K4-001) 12020824-12143823 protein_coding
ENST00000415385 (MAP2K4-002) 12020834-12143830 protein_coding
ENST00000536413 (MAP2K4-005) 12124299-12143730 retained_intron
ENST00000538465 (MAP2K4-008) 12020976-12141621 nonsense_mediated_decay
ENST00000579089 (MAP2K4-009) 12069756-12125350 processed_transcript
ENST00000581941 (MAP2K4-003) 12069657-12125318 processed_transcript
ENST00000582183 (MAP2K4-010) 12020829-12113318 nonsense_mediated_decay
ENST00000582377 (MAP2K4-004) 12095602-12110809 retained_intron
ENST00000582897 (MAP2K4-006) 12026887-12095694 processed_transcript
ENST00000585076 (MAP2K4-007) 12113040-12129282 retained_intron
ENST00000602305 (MAP2K4-013) 12020870-12141282 nonsense_mediated_decay
ENST00000602375 (MAP2K4-012) 12020870-12141282 nonsense_mediated_decay
ENST00000602537 (MAP2K4-015) 12020887-12141260 nonsense_mediated_decay
ENST00000602686 (MAP2K4-014) 12020887-12141260 nonsense_mediated_decay
ENST00000602811 (MAP2K4-011) 12020870-12141282 nonsense_mediated_decay
ENSG00000154957 (ZNF18)
zinc finger protein 18 		ENST00000322748 (ZNF18-002) 11977445-11997372 protein_coding
ENST00000454073 (ZNF18-004) 11977452-11997457 protein_coding
ENST00000577671 (ZNF18-007) 11978261-11991013 protein_coding
ENST00000580306 (ZNF18-001) 11977439-11997510 protein_coding
ENST00000580613 (ZNF18-201) 11977445-11992917 protein_coding
ENST00000580903 (ZNF18-005) 11992540-11997475 protein_coding
ENST00000582607 (ZNF18-006) 11978339-11991020 protein_coding
ENSG00000241185 (RPL21P122)
ribosomal protein L21 pseudogene 122 		ENST00000460347 (RPL21P122-001) 12010740-12011224 transcribed_processed_pseudogene
ENST00000578024 (RPL21P122-002) 12010771-12021346 processed_transcript
ENST00000579522 (RPL21P122-003) 11998353-12021508 processed_transcript
ENSG00000252707 (RNU11-2P)
RNA, U11 small nuclear 2, pseudogene 		ENST00000516898 (RNU11-2P-201) 12036496-12036637 snRNA
ENSG00000263648 (RP11-471L13.3)
 ENST00000582566 (RP11-471L13.3-001) 12115547-12115885 processed_pseudogene
ENSG00000265400 (RP11-471L13.2)
 ENST00000585228 (RP11-471L13.2-001) 12201600-12215267 lincRNA
ENSG00000266297 (MIR744)
microRNA 744 		ENST00000578242 (MIR744-201) 12081899-12081996 miRNA
CIL_0008WK_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
mm85 VISTA 10090 11:65348906-65951643
GeneTranscriptPositionBiotype
ENSMUSG00000018347 (Zkscan6)
zinc finger with KRAB and SCAN domains 6 		ENSMUST00000018491 (Zkscan6-001) 65807244-65829239 protein_coding
ENSMUST00000071465 (Zkscan6-002) 65807175-65829238 protein_coding
ENSMUSG00000033352 (Map2k4)
mitogen-activated protein kinase kinase 4 		ENSMUST00000046963 (Map2k4-005) 65688243-65788297 protein_coding
ENSMUST00000125598 (Map2k4-007) 65690333-65719603 protein_coding
ENSMUST00000130009 (Map2k4-002) 65712220-65788285 nonsense_mediated_decay
ENSMUST00000138093 (Map2k4-004) 65719539-65745838 processed_transcript
ENSMUST00000140301 (Map2k4-001) 65696288-65788285 nonsense_mediated_decay
ENSMUST00000140740 (Map2k4-006) 65691728-65697014 processed_transcript
ENSMUST00000152096 (Map2k4-003) 65712219-65788286 protein_coding
ENSMUSG00000056752 (Dnah9)
dynein, axonemal, heavy chain 9 		ENSMUST00000080665 (Dnah9-001) 65831282-66168533 protein_coding
ENSMUST00000108691 (Dnah9-006) 66121091-66168444 protein_coding
ENSMUST00000130739 (Dnah9-002) 65906857-65927958 protein_coding
ENSMUST00000136124 (Dnah9-003) 65851185-65855707 retained_intron
ENSMUST00000142836 (Dnah9-005) 66158752-66168551 retained_intron
ENSMUST00000152386 (Dnah9-004) 65831403-66005195 protein_coding
ENSMUSG00000085162 (Gm12295)
predicted gene 12295 		ENSMUST00000128453 (Gm12295-001) 65277654-65287833 lincRNA
ENSMUST00000130362 (Gm12295-002) 65285936-65365798 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008WK_0001ENSG00000007174ENST00000262442ENST00000396001ENST00000454412ENST00000579406ENST00000579703ENST00000579828ENST00000583192ENST00000608377ENSG00000065559ENST00000353533ENST00000415385ENST00000536413ENST00000579089ENST00000581941ENST00000582897ENST00000602375ENSG00000154957ENST00000322748ENST00000454073ENST00000577671ENST00000580306ENST00000580613ENST00000582607ENSG00000241185ENST00000460347ENST00000578024ENST00000579522ENSG00000252707ENST00000516898ENSG00000263648ENST00000582566ENSG00000265400ENST00000585228ENSG00000266297ENST00000578242CIL_0008WK_0002ENSMUSG00000018347ENSMUST00000018491ENSMUST00000071465ENSMUSG00000033352ENSMUST00000046963ENSMUST00000125598ENSMUST00000130009ENSMUST00000140301ENSMUST00000152096ENSMUSG00000056752ENSMUST00000080665ENSMUST00000108691ENSMUST00000130739ENSMUST00000142836ENSMUST00000152386ENSMUSG00000085162ENSMUST00000128453ENSMUST00000130362
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000007174 ENST00000262442 N/A N/A N/A N/A N/A N/A N/A 0.029±0.00 0.041±0.00 1.252±0.00 N/A N/A 0.011±0.00 N/A
ENST00000396001 N/A 0.037±0.00 N/A N/A N/A N/A N/A N/A N/A 2.182±0.00 N/A N/A 0.037±0.02 0.925±0.00
ENST00000454412 N/A N/A N/A 0.137±0.08 0.018±0.00 0.028±0.00 0.005±0.00 N/A N/A 0.384±0.00 N/A 0.024±0.02 0.009±0.00 0.399±0.16
ENST00000578834 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000579406 0.376±0.00 0.287±0.00 N/A N/A 0.159±0.00 0.172±0.00 0.144±0.00 0.313±0.00 0.010±0.00 N/A 0.010±0.00 0.170±0.02 N/A N/A
ENST00000579602 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000579703 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.118±0.00 N/A
ENST00000579813 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000579828 0.452±0.00 N/A 0.298±0.00 1.887±0.87 0.443±0.00 0.053±0.00 N/A 0.786±0.00 0.276±0.00 3.808±0.00 N/A 2.488±1.71 0.105±0.02 1.057±0.00
ENST00000580255 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000581682 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583192 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.373±0.00 N/A N/A
ENST00000584663 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000585197 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000608377 N/A 0.035±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.030±0.01 N/A
ENSG00000065559 ENST00000353533 1.505±0.00 1.318±0.00 2.349±0.00 13.195±7.05 1.007±0.15 1.408±0.91 3.674±2.29 3.151±0.27 1.911±0.55 1.058±0.06 1.046±0.77 2.595±0.65 4.602±1.18 3.290±1.40
ENST00000415385 N/A 1.076±0.00 N/A 4.019±0.00 N/A N/A 0.771±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000536413 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.432±0.00 1.036±0.00 N/A N/A
ENST00000538465 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000579089 N/A N/A N/A N/A N/A N/A N/A N/A 8.590±0.00 N/A N/A N/A N/A N/A
ENST00000581941 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.816±0.00 N/A N/A
ENST00000582183 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582377 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582897 N/A N/A N/A N/A N/A N/A 3.394±0.00 N/A N/A N/A N/A 3.843±0.00 10.625±0.00 7.017±0.00
ENST00000585076 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000602305 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000602375 N/A N/A 1.635±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000602537 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000602686 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000602811 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000154957 ENST00000322748 0.302±0.00 N/A N/A N/A 0.450±0.00 0.569±0.00 0.306±0.00 0.919±0.00 0.515±0.05 0.374±0.00 N/A N/A 0.112±0.00 N/A
ENST00000454073 0.529±0.00 1.348±0.00 N/A 1.205±0.00 1.092±0.74 0.642±0.46 0.635±0.03 N/A 1.045±0.00 0.632±0.00 0.051±0.00 0.888±0.42 0.865±0.28 1.559±0.00
ENST00000577671 N/A N/A N/A N/A N/A 0.967±0.00 N/A N/A N/A N/A N/A 0.436±0.00 N/A N/A
ENST00000580306 1.218±0.00 2.685±0.00 N/A 2.808±0.00 N/A N/A N/A 1.771±0.00 N/A 1.071±0.00 2.082±0.00 2.570±0.00 N/A N/A
ENST00000580613 N/A N/A N/A 0.199±0.00 0.459±0.00 0.350±0.00 N/A N/A N/A 0.842±0.00 0.262±0.00 2.132±0.00 1.023±0.54 5.632±0.31
ENST00000580903 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582607 N/A N/A 0.639±0.00 N/A N/A 0.816±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000241185 ENST00000460347 N/A N/A N/A 0.158±0.00 0.026±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000578024 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.122±0.00 N/A 0.073±0.03
ENST00000579522 0.431±0.00 0.775±0.00 N/A 4.986±0.00 0.553±0.00 0.373±0.00 0.326±0.00 0.763±0.00 0.062±0.00 1.245±0.00 0.060±0.00 0.147±0.01 0.217±0.00 0.548±0.00
ENSG00000252707 ENST00000516898 N/A N/A N/A 2.403±2.28 N/A N/A N/A 0.123±0.00 N/A 2.031±0.00 N/A N/A N/A N/A
ENSG00000263648 ENST00000582566 N/A 0.233±0.00 N/A 0.857±0.63 1.584±1.40 N/A 0.742±0.00 N/A 1.322±0.00 0.766±0.38 0.034±0.00 0.601±0.60 N/A 0.205±0.00
ENSG00000265400 ENST00000585228 0.034±0.00 0.105±0.00 N/A N/A 0.017±0.00 N/A 0.047±0.00 0.017±0.00 N/A N/A 0.076±0.00 N/A N/A N/A
ENSG00000266297 ENST00000578242 N/A 1.452±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000018347 ENSMUST00000018491 N/A 1.400±0.00 N/A N/A N/A N/A 0.130±0.00 0.261±0.00 0.321±0.00 0.349±0.00 N/A 1.373±0.69 1.111±0.35 1.729±0.73
ENSMUST00000071465 1.976±0.65 1.795±0.63 2.994±0.69 3.677±0.63 1.874±0.60 3.016±0.42 0.707±0.27 1.532±0.26 1.806±0.67 1.618±0.46 0.916±0.26 3.470±1.73 2.810±1.05 4.422±0.55
ENSMUSG00000033352 ENSMUST00000046963 5.162±1.07 6.364±3.08 14.265±2.92 17.785±5.68 3.818±2.35 2.768±0.55 4.403±0.28 4.474±0.59 8.233±4.33 6.777±1.89 15.505±1.93 9.245±4.61 15.491±5.48 1.089±0.26
ENSMUST00000125598 N/A N/A N/A 43.468±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 14.887±2.10 N/A
ENSMUST00000130009 N/A N/A N/A N/A N/A 7.661±0.03 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138093 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140301 N/A 12.996±1.43 N/A N/A N/A N/A N/A N/A N/A N/A N/A 12.456±0.00 18.577±0.00 N/A
ENSMUST00000140740 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152096 N/A N/A N/A 113.141±0.00 N/A N/A N/A N/A N/A N/A N/A 28.807±14.70 73.957±4.68 10.890±0.00
ENSMUSG00000056752 ENSMUST00000080665 0.004±0.00 0.005±0.00 N/A 0.333±0.09 0.003±0.00 0.045±0.02 0.030±0.00 0.006±0.00 0.003±0.00 0.628±0.26 N/A 0.988±0.48 0.008±0.00 0.083±0.02
ENSMUST00000108691 0.014±0.00 N/A N/A N/A N/A 0.088±0.00 N/A N/A N/A N/A 0.016±0.00 N/A N/A N/A
ENSMUST00000130739 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.056±0.02 N/A
ENSMUST00000136124 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142836 0.017±0.00 0.036±0.00 N/A N/A N/A N/A N/A 0.017±0.00 0.013±0.00 N/A N/A N/A N/A N/A
ENSMUST00000152386 0.007±0.00 N/A N/A 0.336±0.16 0.017±0.01 0.108±0.07 0.083±0.00 0.006±0.00 0.007±0.00 0.640±0.14 0.006±0.00 1.078±0.39 0.023±0.01 0.622±0.46
ENSMUSG00000085162 ENSMUST00000128453 0.065±0.05 0.050±0.00 0.633±0.09 0.006±0.00 0.022±0.01 0.102±0.06 0.424±0.25 0.026±0.01 0.006±0.00 0.103±0.02 0.037±0.02 0.260±0.20 0.030±0.03 0.016±0.01
ENSMUST00000130362 N/A N/A N/A 0.017±0.00 N/A N/A 0.636±0.00 N/A N/A 0.112±0.02 0.337±0.10 N/A 0.093±0.00 N/A

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