C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: centromere protein V
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000018509 Cenpv 10090 - 11:62524946-62539261 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000018653 Cenpv-001 62524946-62539261 protein_coding
  ENSMUST00000123181 Cenpv-006 62533887-62539003 nonsense_mediated_decay
  ENSMUST00000123542 Cenpv-004 62525143-62538485 processed_transcript
  ENSMUST00000135497 Cenpv-002 62524949-62527896 retained_intron
  ENSMUST00000138772 Cenpv-005 62534118-62539003 processed_transcript
  ENSMUST00000156349 Cenpv-003 62527493-62538629 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000018653ENSMUST00000123542ENSMUST00000135497ENSMUST00000138772
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000018653 18.258±2.23 19.422±4.15 13.903±3.77 39.077±28.23 16.192±7.95 21.309±2.98 14.162±3.29 13.839±1.80 16.412±7.59 5.632±0.64 9.260±2.17 26.919±8.50 6.820±2.47 340.138±11.23
ENSMUST00000123542 5.755±0.16 12.240±0.20 6.451±0.00 15.111±0.00 7.455±0.55 12.999±2.04 5.009±1.05 5.921±2.07 7.912±0.92 3.030±0.72 N/A 18.927±11.47 4.711±2.41 124.149±20.40
ENSMUST00000135497 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.236±0.00 N/A N/A
ENSMUST00000138772 N/A 26.434±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.622±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006JP CIL_0006JP_0003 CGP 11:62458460-62539261
CIL_00058V CIL_00058V_0003 CGP 11:62524946-62553213

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000776 ISS kinetochore
GO:0001667 IEA ameboidal cell migration
GO:0003674 ND molecular_function
GO:0005634 ISS nucleus
GO:0005737 IEA cytoplasm
GO:0007067 IEA mitotic nuclear division
GO:0015630 IEA microtubule cytoskeleton
GO:0016846 IEA carbon-sulfur lyase activity
GO:0031508 ISS pericentric heterochromatin assembly
GO:0032467 ISS positive regulation of cytokinesis
GO:0033044 ISS regulation of chromosome organization
GO:0034508 ISS centromere complex assembly
GO:0051233 ISS spindle midzone

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000092285 cenpv centromere protein V protein_coding Danio_rerio
ENSG00000166582 CENPV centromere protein V protein_coding Homo_sapiens

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