C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Region Summary |
| CIL_0006JP_0001 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSDARG00000067752-ENSDARG00000092285 | CGP | 7955 | 5:43615471-43678760  |
|
| Gene | Transcript | Position | Biotype | |
ENSDARG00000067752  (pigl)phosphatidylinositol glycan anchor biosynthesis, class L |
ENSDART00000097580 (pigl-001)
|
43615471-43672652 | protein_coding | |
|
ENSDARG00000092285 (cenpv) centromere protein V |
ENSDART00000147407 (cenpv-002)
|
43672944-43678760 | protein_coding | |
|
ENSDART00000148021 (cenpv-001)
|
43673220-43678703 | protein_coding | ||
| CIL_0006JP_0002 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSG00000108474-ENSG00000166582 | CGP | 9606 | 17:16217191-16353656 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSG00000141027 (NCOR1) nuclear receptor corepressor 1 |
ENST00000268712 (NCOR1-001)
|
16029157-16215549 | protein_coding | |
|
ENST00000395848 (NCOR1-007)
|
16091564-16194639 | protein_coding | ||
|
ENST00000395849 (NCOR1-018)
|
16032092-16080007 | protein_coding | ||
|
ENST00000395851 (NCOR1-003)
|
16031404-16194613 | protein_coding | ||
|
ENST00000395857 (NCOR1-201)
|
16030096-16215560 | protein_coding | ||
|
ENST00000411510 (NCOR1-009)
|
16126082-16215537 | protein_coding | ||
|
ENST00000430577 (NCOR1-012)
|
16171863-16218185 | protein_coding | ||
|
ENST00000436068 (NCOR1-006)
|
16086399-16091918 | protein_coding | ||
|
ENST00000436828 (NCOR1-002)
|
16126132-16215530 | protein_coding | ||
|
ENST00000458113 (NCOR1-022)
|
16046900-16080513 | retained_intron | ||
|
ENST00000460276 (NCOR1-008)
|
16126132-16215530 | nonsense_mediated_decay | ||
|
ENST00000464381 (NCOR1-010)
|
16031404-16058336 | retained_intron | ||
|
ENST00000466825 (NCOR1-011)
|
16198171-16215401 | processed_transcript | ||
|
ENST00000470782 (NCOR1-005)
|
16031404-16068412 | retained_intron | ||
|
ENST00000472189 (NCOR1-013)
|
16056974-16057935 | retained_intron | ||
|
ENST00000579573 (NCOR1-026)
|
16032473-16047035 | protein_coding | ||
|
ENST00000579606 (NCOR1-025)
|
16040445-16057730 | protein_coding | ||
|
ENST00000579974 (NCOR1-021)
|
16164906-16194611 | retained_intron | ||
|
ENST00000580554 (NCOR1-015)
|
16039517-16057723 | protein_coding | ||
|
ENST00000580617 (NCOR1-024)
|
16031988-16040108 | retained_intron | ||
|
ENST00000582357 (NCOR1-017)
|
16126107-16215529 | protein_coding | ||
|
ENST00000582565 (NCOR1-023)
|
16032433-16040659 | retained_intron | ||
|
ENST00000583226 (NCOR1-028)
|
16101718-16122635 | processed_transcript | ||
|
ENST00000583234 (NCOR1-014)
|
16046892-16049397 | retained_intron | ||
|
ENST00000584872 (NCOR1-027)
|
16061867-16065885 | retained_intron | ||
|
ENST00000585296 (NCOR1-020)
|
16164871-16215548 | retained_intron | ||
|
ENST00000603989 (NCOR1-029)
|
16039220-16039466 | protein_coding | ||
| CIL_0006JP_0003 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSMUSG00000014245-ENSMUSG00000018509 | CGP | 10090 | 11:62458460-62539261 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSMUSG00000018501 (Ncor1) nuclear receptor co-repressor 1 |
ENSMUST00000018645 (Ncor1-001)
|
62316426-62457332 | protein_coding | |
|
ENSMUST00000037575 (Ncor1-201)
|
62317797-62359791 | protein_coding | ||
|
ENSMUST00000069456 (Ncor1-010)
|
62401383-62457323 | protein_coding | ||
|
ENSMUST00000101066 (Ncor1-202)
|
62316426-62438515 | protein_coding | ||
|
ENSMUST00000101067 (Ncor1-004)
|
62317797-62438481 | protein_coding | ||
|
ENSMUST00000101068 (Ncor1-008)
|
62366944-62438515 | retained_intron | ||
|
ENSMUST00000124027 (Ncor1-011)
|
62395186-62401550 | retained_intron | ||
|
ENSMUST00000127471 (Ncor1-009)
|
62373386-62457806 | protein_coding | ||
|
ENSMUST00000131911 (Ncor1-006)
|
62325262-62330044 | retained_intron | ||
|
ENSMUST00000141447 (Ncor1-012)
|
62419730-62458541 | protein_coding | ||
|
ENSMUST00000151498 (Ncor1-019)
|
62344785-62392659 | protein_coding | ||
|
ENSMUST00000155486 (Ncor1-007)
|
62384757-62438515 | protein_coding | ||
|
ENSMUST00000155712 (Ncor1-003)
|
62316690-62378517 | protein_coding | ||
|
ENSMUST00000156740 (Ncor1-013)
|
62317797-62359015 | protein_coding | ||
|
ENSMUST00000159069 (Ncor1-002)
|
62344785-62392659 | protein_coding | ||
|
ENSMUST00000159224 (Ncor1-021)
|
62343021-62351390 | protein_coding | ||
|
ENSMUST00000159315 (Ncor1-025)
|
62317601-62321221 | protein_coding | ||
|
ENSMUST00000160171 (Ncor1-014)
|
62392049-62395192 | retained_intron | ||
|
ENSMUST00000161116 (Ncor1-020)
|
62353906-62369301 | protein_coding | ||
|
ENSMUST00000161281 (Ncor1-024)
|
62327131-62330943 | retained_intron | ||
|
ENSMUST00000161288 (Ncor1-017)
|
62373319-62383205 | protein_coding | ||
|
ENSMUST00000161432 (Ncor1-022)
|
62340455-62344901 | retained_intron | ||
|
ENSMUST00000161699 (Ncor1-015)
|
62373364-62384843 | protein_coding | ||
|
ENSMUST00000161767 (Ncor1-023)
|
62325512-62330168 | retained_intron | ||
|
ENSMUST00000162077 (Ncor1-016)
|
62376616-62383263 | retained_intron | ||
|
ENSMUST00000162236 (Ncor1-018)
|
62373384-62383354 | protein_coding | ||
|
ENSMUSG00000018509 (Cenpv) centromere protein V |
ENSMUST00000018653 (Cenpv-001)
|
62524946-62539261 | protein_coding | |
|
ENSMUST00000123181 (Cenpv-006)
|
62533887-62539003 | nonsense_mediated_decay | ||
|
ENSMUST00000123542 (Cenpv-004)
|
62525143-62538485 | processed_transcript | ||
|
ENSMUST00000135497 (Cenpv-002)
|
62524949-62527896 | retained_intron | ||
|
ENSMUST00000138772 (Cenpv-005)
|
62534118-62539003 | processed_transcript | ||
|
ENSMUST00000156349 (Cenpv-003)
|
62527493-62538629 | processed_transcript | ||
|
ENSMUSG00000086310 (Gm12278) predicted gene 12278 |
ENSMUST00000153718 (Gm12278-001)
|
62482797-62501704 | antisense | |
|
ENSMUSG00000086636 (Gm12949) predicted gene 12949 |
ENSMUST00000143382 (Gm12949-001)
|
62522741-62523542 | antisense | |
Expression Patterns
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