C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: GTPase activating protein (SH3 domain) binding protein 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000018583 G3bp1 10090 + 11:55469685-55504838 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000018727 G3bp1-001 55469685-55504838 protein_coding
  ENSMUST00000151790 G3bp1-002 55469718-55487512 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000018727
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000018727 16.598±6.47 20.658±1.99 18.759±0.77 15.558±6.08 15.449±1.90 17.414±0.89 10.339±0.79 13.708±0.79 14.454±7.40 12.465±0.38 14.111±1.95 23.185±2.13 22.582±15.02 3.115±1.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001U9 CIL_0001U9_0002 CGP 11:55469685-55608198

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003729 IDA mRNA binding
GO:0004386 IEA helicase activity
GO:0004519 IEA endonuclease activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005886 IEA plasma membrane
GO:0005925 IEA focal adhesion
GO:0006810 IEA transport
GO:0010494 IDA cytoplasmic stress granule
GO:0044822 IEA poly(A) RNA binding
GO:0090090 IMP negative regulation of canonical Wnt signaling pathway
GO:0090305 IEA nucleic acid phosphodiester bond hydrolysis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000017741 g3bp1 GTPase activating protein (SH3 domain) binding protein 1 protein_coding Danio_rerio
ENSG00000145907 G3BP1 GTPase activating protein (SH3 domain) binding protein 1 protein_coding Homo_sapiens

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