C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: glycine receptor, alpha 4 subunit
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000018595 Glra4 10090 - X:136757674-136780141 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000018739 Glra4-001 136757674-136780141 protein_coding
  ENSMUST00000154833 Glra4-002 136767005-136780141 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000018739ENSMUST00000154833
Transcript ID Adipose Brain Breast Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000018739 N/A 0.060±0.05 N/A N/A 0.013±0.01 N/A N/A 0.055±0.05 0.031±0.03 0.036±0.01
ENSMUST00000154833 0.021±0.00 0.017±0.00 0.020±0.00 0.019±0.00 0.023±0.01 0.034±0.00 0.029±0.00 0.055±0.02 0.030±0.00 0.023±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004U4 CIL_0004U4_0002 CGP X:136732942-136780141

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005230 IEA extracellular ligand-gated ion channel activity
GO:0005254 IEA chloride channel activity
GO:0005887 IEA integral component of plasma membrane
GO:0016594 IEA glycine binding
GO:0022824 IEA transmitter-gated ion channel activity
GO:0030054 IEA cell junction
GO:0034707 IEA chloride channel complex
GO:0045211 IEA postsynaptic membrane
GO:1902476 IEA chloride transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000006865 glra4a glycine receptor, alpha 4a protein_coding Danio_rerio
ENSDARG00000058103 glra4b glycine receptor, alpha 4b protein_coding Danio_rerio
ENSG00000188828 GLRA4 glycine receptor, alpha 4 protein_coding Homo_sapiens

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