C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glycine receptor, alpha 4 subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000154833 Glra4-002 ENSMUSG00000018595 10090 - X:136767005-136780141 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000154833
Transcript ID Adipose Brain Breast Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000154833 0.021±0.00 0.017±0.00 0.020±0.00 0.019±0.00 0.023±0.01 0.034±0.00 0.029±0.00 0.055±0.02 0.030±0.00 0.023±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004U4 CIL_0004U4_0002 CGP X:136732942-136780141

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000009777 GLRA3-201 protein_coding Danio_rerio 0 324
ENSDART00000108535 GABRB1-201 protein_coding Danio_rerio 0.000000004 68
ENSDART00000087300 gabrb3-001 protein_coding Danio_rerio 0.000000004 68
ENST00000372617 GLRA4-001 protein_coding Homo_sapiens 0 1509
ENST00000436213 GLRA4-003 nonsense_mediated_decay Homo_sapiens 0 564
ENST00000480725 GLRA4-004 retained_intron Homo_sapiens 0 1535

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