C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00067F_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000133195-ENSG00000180616 CGP 9606 17:72645949-73176633
GeneTranscriptPositionBiotype
ENSG00000133195 (SLC39A11)
solute carrier family 39, member 11 		ENST00000255559 (SLC39A11-001) 72645949-73092693 protein_coding
ENST00000542342 (SLC39A11-002) 72645950-73092688 protein_coding
ENST00000578620 (SLC39A11-004) 73088688-73092687 protein_coding
ENST00000579018 (SLC39A11-005) 73084835-73092712 protein_coding
ENST00000579319 (SLC39A11-014) 72712822-72849776 nonsense_mediated_decay
ENST00000579491 (SLC39A11-011) 72823607-72992949 processed_transcript
ENST00000579732 (SLC39A11-012) 72837800-73092681 protein_coding
ENST00000579988 (SLC39A11-017) 72647109-72725614 processed_transcript
ENST00000580557 (SLC39A11-003) 72849634-73092676 protein_coding
ENST00000581005 (SLC39A11-009) 73072269-73092678 processed_transcript
ENST00000581581 (SLC39A11-015) 72712739-72849706 protein_coding
ENST00000582179 (SLC39A11-008) 72947663-73092687 retained_intron
ENST00000582769 (SLC39A11-016) 72648923-72992933 protein_coding
ENST00000583146 (SLC39A11-007) 72849786-73089764 protein_coding
ENST00000583507 (SLC39A11-006) 73091839-73092710 processed_transcript
ENST00000583715 (SLC39A11-013) 72821605-72849804 protein_coding
ENST00000584129 (SLC39A11-010) 72823698-72992932 nonsense_mediated_decay
ENSG00000180616 (SSTR2)
somatostatin receptor 2 		ENST00000357585 (SSTR2-001) 73165012-73176633 protein_coding
ENST00000579323 (SSTR2-004) 73165012-73169311 processed_transcript
ENSG00000200783 (RN7SKP180)
RNA, 7SK small nuclear pseudogene 180 		ENST00000363913 (RN7SKP180-201) 72663823-72664152 misc_RNA
ENSG00000222545 (AC080037.1)
 ENST00000410613 (AC080037.1-201) 72714383-72714471 miRNA
ENSG00000252274 (SCARNA24)
Small Cajal body specific RNA 24 		ENST00000516465 (SCARNA24.1-201) 72818836-72818972 snoRNA
ENSG00000264196 (RP11-171G2.1)
 ENST00000583916 (RP11-171G2.1-001) 72839039-72839718 antisense
ENSG00000266501 (RP11-766H1.1)
 ENST00000578331 (RP11-766H1.1-001) 73067870-73068288 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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CIL_00067F_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000041654-ENSMUSG00000041654 CGP 10090 11:113244853-113650079
GeneTranscriptPositionBiotype
ENSMUSG00000018661 (Cog1)
component of oligomeric golgi complex 1 		ENSMUST00000018805 (Cog1-001) 113649169-113662947 protein_coding
ENSMUST00000063776 (Cog1-002) 113649328-113662399 protein_coding
ENSMUST00000123085 (Cog1-007) 113654687-113656249 retained_intron
ENSMUST00000134418 (Cog1-004) 113657530-113661665 protein_coding
ENSMUST00000137878 (Cog1-003) 113659283-113662400 protein_coding
ENSMUST00000142069 (Cog1-006) 113657512-113661629 protein_coding
ENSMUST00000148736 (Cog1-008) 113657375-113667054 protein_coding
ENSMUST00000152653 (Cog1-005) 113658578-113662400 nonsense_mediated_decay
ENSMUSG00000041654 (Slc39a11)
solute carrier family 39 (metal ion transporter), member 11 		ENSMUST00000042657 (Slc39a11-002) 113244853-113565768 protein_coding
ENSMUST00000071539 (Slc39a11-001) 113244853-113565756 protein_coding
ENSMUST00000106633 (Slc39a11-004) 113244853-113565759 protein_coding
ENSMUST00000123153 (Slc39a11-006) 113577643-113650070 processed_transcript
ENSMUST00000125890 (Slc39a11-007) 113369728-113650071 protein_coding
ENSMUST00000136392 (Slc39a11-008) 113559532-113650070 protein_coding
ENSMUST00000146031 (Slc39a11-005) 113523587-113650079 protein_coding
ENSMUST00000149034 (Slc39a11-003) 113463953-113565779 protein_coding
ENSMUSG00000047904 (Sstr2)
somatostatin receptor 2 		ENSMUST00000067591 (Sstr2-201) 113624257-113625636 protein_coding
ENSMUST00000106630 (Sstr2-001) 113619476-113625895 protein_coding
ENSMUST00000146390 (Sstr2-002) 113619342-113626028 protein_coding
ENSMUSG00000078251 (Gm16487)
predicted gene 16487 		ENSMUST00000105048 (Gm16487-201) 113467977-113472014 pseudogene

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00067F_0001ENSG00000133195ENST00000255559ENST00000542342ENST00000578620ENST00000579018ENST00000579319ENST00000579491ENST00000579732ENST00000579988ENST00000580557ENST00000581005ENST00000581581ENST00000582179ENST00000582769ENST00000583146ENST00000583507ENST00000583715ENST00000584129ENSG00000180616ENST00000357585ENST00000579323ENSG00000200783ENST00000363913ENSG00000222545ENST00000410613ENSG00000252274ENST00000516465ENSG00000264196ENST00000583916ENSG00000266501ENST00000578331CIL_00067F_0002ENSMUSG00000018661ENSMUST00000018805ENSMUST00000063776ENSMUST00000123085ENSMUST00000134418ENSMUST00000137878ENSMUST00000142069ENSMUST00000148736ENSMUST00000152653ENSMUSG00000041654ENSMUST00000042657ENSMUST00000071539ENSMUST00000106633ENSMUST00000123153ENSMUST00000125890ENSMUST00000136392ENSMUST00000146031ENSMUST00000149034ENSMUSG00000047904ENSMUST00000067591ENSMUST00000106630ENSMUST00000146390ENSMUSG00000078251ENSMUST00000105048
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00067F_0001ENSG00000133195ENST00000255559ENST00000542342ENST00000579491ENST00000579988ENST00000580557ENST00000582769ENSG00000180616ENST00000357585ENSG00000200783ENST00000363913ENSG00000222545ENST00000410613ENSG00000252274ENST00000516465ENSG00000264196ENST00000583916ENSG00000266501ENST00000578331CIL_00067F_0002ENSMUSG00000018661ENSMUST00000018805ENSMUSG00000041654ENSMUST00000042657ENSMUST00000071539ENSMUST00000106633ENSMUST00000125890ENSMUST00000149034ENSMUSG00000047904ENSMUST00000067591ENSMUST00000106630ENSMUST00000146390ENSMUSG00000078251ENSMUST00000105048
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000133195 ENST00000255559 2.772±0.00 4.475±0.00 1.126±0.00 2.966±0.00 2.711±1.36 2.049±0.13 1.345±0.00 5.253±0.70 5.644±0.00 1.608±0.97 0.115±0.00 4.702±1.93 6.013±3.83 2.440±0.31
ENST00000542342 3.153±0.00 N/A N/A 2.441±0.00 2.069±0.00 1.095±0.00 N/A N/A 2.345±0.00 0.787±0.21 N/A 2.129±0.38 1.855±0.36 1.142±0.00
ENST00000578620 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000579018 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000579319 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000579491 N/A N/A N/A N/A 2.544±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000579732 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000579988 N/A N/A N/A N/A N/A N/A N/A N/A 1.059±0.00 N/A N/A N/A N/A N/A
ENST00000580557 N/A N/A 2.359±0.00 N/A N/A N/A 0.637±0.00 N/A N/A 2.132±0.00 N/A N/A N/A N/A
ENST00000581005 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000581581 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582179 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582769 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.433±0.00 N/A N/A N/A 9.081±0.00
ENST00000583146 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583507 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583715 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000584129 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000180616 ENST00000357585 4.610±0.00 2.464±0.00 0.739±0.00 3.841±1.25 N/A 1.424±0.00 N/A 5.469±0.00 0.657±0.00 1.395±0.00 N/A N/A N/A N/A
ENST00000579323 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000200783 ENST00000363913 N/A 0.128±0.00 N/A 0.972±0.62 0.740±0.00 0.184±0.00 N/A 0.065±0.00 N/A 2.109±0.00 N/A 0.429±0.28 N/A N/A
ENSG00000222545 ENST00000410613 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.309±0.00 N/A N/A
ENSG00000252274 ENST00000516465 N/A N/A N/A N/A 0.231±0.00 N/A N/A 0.468±0.00 N/A 0.256±0.00 N/A N/A 0.871±0.00 0.386±0.00
ENSG00000264196 ENST00000583916 N/A 0.046±0.00 N/A 0.024±0.00 0.293±0.00 N/A 0.021±0.00 0.205±0.00 N/A 0.050±0.00 N/A N/A N/A N/A
ENSG00000266501 ENST00000578331 0.252±0.00 N/A 1.360±0.00 0.161±0.12 N/A 0.326±0.00 0.290±0.00 N/A 0.282±0.00 0.033±0.00 N/A 0.078±0.00 0.155±0.00 0.081±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000018661 ENSMUST00000018805 8.375±4.05 8.241±1.88 12.403±0.00 28.453±6.48 5.554±1.48 12.893±5.72 1.718±0.42 8.126±2.65 5.711±3.29 7.718±2.55 3.856±0.00 5.153±0.81 2.964±0.99 28.412±4.51
ENSMUST00000063776 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000123085 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134418 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137878 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142069 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148736 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152653 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000041654 ENSMUST00000042657 N/A 2.058±0.23 N/A N/A N/A N/A 0.406±0.21 N/A 1.824±0.00 N/A N/A N/A N/A 0.555±0.00
ENSMUST00000071539 4.545±0.78 4.777±1.75 3.968±1.60 2.048±0.24 4.696±1.39 34.004±2.52 0.763±0.14 8.281±1.84 5.736±2.36 5.047±0.91 0.777±0.26 7.147±0.93 3.795±1.24 1.141±0.37
ENSMUST00000106633 2.738±1.00 3.377±1.13 1.109±0.00 3.984±2.06 3.462±1.27 6.967±1.25 0.353±0.06 2.659±0.81 2.674±1.22 N/A 0.263±0.09 2.848±0.98 2.738±0.21 2.693±1.23
ENSMUST00000123153 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000125890 5.350±0.00 10.134±1.59 N/A N/A 7.120±1.13 22.978±4.77 N/A 7.152±0.49 N/A 6.724±0.00 N/A 8.432±2.02 N/A 3.455±0.33
ENSMUST00000136392 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146031 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149034 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.644±0.00 N/A N/A N/A
ENSMUSG00000047904 ENSMUST00000067591 0.006±0.00 0.426±0.14 N/A 5.764±3.26 0.050±0.02 2.550±0.64 N/A 0.302±0.00 0.218±0.36 0.601±0.19 N/A 0.421±0.23 0.089±0.04 0.434±0.16
ENSMUST00000106630 0.043±0.01 N/A 0.013±0.00 N/A 0.053±0.00 N/A N/A N/A 0.495±0.30 N/A N/A N/A 0.076±0.00 0.146±0.00
ENSMUST00000146390 0.030±0.01 0.880±0.24 0.067±0.03 9.969±6.47 0.032±0.00 1.720±0.38 N/A 0.170±0.05 0.990±0.81 0.963±0.24 N/A 0.154±0.09 0.194±0.09 0.180±0.13
ENSMUSG00000078251 ENSMUST00000105048 0.021±0.01 0.018±0.01 0.007±0.00 0.005±0.00 0.020±0.00 0.052±0.02 0.015±0.01 0.056±0.02 0.010±0.01 0.007±0.00 N/A 0.049±0.02 0.012±0.00 0.008±0.00

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