C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: acyl-CoA synthetase long-chain family member 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000018796 Acsl1 10090 + 8:46471041-46536051 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000034046 Acsl1-001 46471041-46536051 protein_coding
  ENSMUST00000110371 Acsl1-005 46492832-46534480 protein_coding
  ENSMUST00000110372 Acsl1-002 46490974-46535581 protein_coding
  ENSMUST00000128746 Acsl1-003 46471099-46516631 retained_intron
  ENSMUST00000130563 Acsl1-006 46490974-46505712 protein_coding
  ENSMUST00000133161 Acsl1-008 46526786-46528652 retained_intron
  ENSMUST00000135955 Acsl1-007 46471177-46511391 protein_coding
  ENSMUST00000152423 Acsl1-004 46531064-46534455 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000034046ENSMUST00000110371ENSMUST00000110372ENSMUST00000135955
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000034046 214.238±70.45 100.875±27.40 16.075±3.04 3.882±0.25 176.272±25.93 7.139±1.63 77.706±2.43 58.557±2.27 126.380±74.46 21.194±2.84 52.910±4.07 19.683±17.02 9.629±7.83 N/A
ENSMUST00000110371 N/A N/A N/A 4.502±0.00 N/A N/A N/A N/A N/A N/A N/A 5.827±0.00 1.608±0.20 145.769±0.00
ENSMUST00000110372 N/A N/A N/A 2.416±0.00 30.450±0.00 1.124±0.00 100.265±7.78 50.495±3.23 31.302±21.43 4.559±0.19 8.737±0.77 3.878±0.00 1.106±0.00 59.846±0.00
ENSMUST00000135955 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 218.370±14.63

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00097G CIL_00097G_0002 VISTA 8:46470571-47072246

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001676 IEA long-chain fatty acid metabolic process
GO:0003824 IEA catalytic activity
GO:0004467 IEA long-chain fatty acid-CoA ligase activity
GO:0005524 IEA ATP binding
GO:0005739 IDA mitochondrion
GO:0005741 IEA mitochondrial outer membrane
GO:0005778 IEA peroxisomal membrane
GO:0005783 IEA endoplasmic reticulum
GO:0005886 IEA plasma membrane
GO:0006631 IEA fatty acid metabolic process
GO:0006641 IEA triglyceride metabolic process
GO:0007584 IEA response to nutrient
GO:0008152 IEA metabolic process
GO:0008610 IEA lipid biosynthetic process
GO:0010033 IEA response to organic substance
GO:0014070 IEA response to organic cyclic compound
GO:0015908 IEA fatty acid transport
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0033211 IMP adiponectin-activated signaling pathway
GO:0034201 IEA response to oleic acid
GO:0042178 IEA xenobiotic catabolic process
GO:0042493 IEA response to drug
GO:0044539 IEA long-chain fatty acid import
GO:0071902 IMP positive regulation of protein serine/threonine kinase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000003854 acsl1b acyl-CoA synthetase long-chain family member 1b protein_coding Danio_rerio
ENSDARG00000030514 acsl1a acyl-CoA synthetase long-chain family member 1a protein_coding Danio_rerio
ENSG00000151726 ACSL1 acyl-CoA synthetase long-chain family member 1 protein_coding Homo_sapiens

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