C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: adaptor-related protein complex AP-4, mu 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000019518 Ap4m1 10090 + 5:138172002-138178708 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000019662 Ap4m1-001 138172002-138178708 protein_coding
  ENSMUST00000134100 Ap4m1-007 138176569-138178687 retained_intron
  ENSMUST00000142687 Ap4m1-006 138174786-138177200 retained_intron
  ENSMUST00000143241 Ap4m1-002 138172068-138178681 nonsense_mediated_decay
  ENSMUST00000151318 Ap4m1-004 138172005-138175013 protein_coding
  ENSMUST00000155745 Ap4m1-005 138172582-138174944 retained_intron
  ENSMUST00000157031 Ap4m1-003 138172047-138174372 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeLungENSMUST00000019662
Transcript ID Adipose Lung
ENSMUST00000019662 17.510±1.03 12.148±0.37

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008QI CIL_0008QI_0002 VISTA 5:137705744-138314172
CIL_0003E2 CIL_0003E2_0002 CGP 5:138161071-138172422
CIL_0003DY CIL_0003DY_0002 CGP 5:138164583-138178708
CIL_0005LK CIL_0005LK_0002 CGP 5:138172002-138187451

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005802 ISS trans-Golgi network
GO:0005905 IEA coated pit
GO:0006886 ISS intracellular protein transport
GO:0006895 ISS Golgi to endosome transport
GO:0016192 TAS vesicle-mediated transport
GO:0030131 IEA clathrin adaptor complex
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000056871 ap4m1 adaptor-related protein complex 4, mu 1 subunit protein_coding Danio_rerio
ENSG00000221838 AP4M1 adaptor-related protein complex 4, mu 1 subunit protein_coding Homo_sapiens

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