C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Region Summary |
| CIL_0003DY_0001 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSG00000166508-ENSG00000221838 | CGP | 9606 | 7:100092728-100110345  |
|
| Gene | Transcript | Position | Biotype | |
ENSG00000106290  (TAF6)TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa |
ENST00000344095 (TAF6-001)
|
100107079-100119346 | protein_coding | |
|
ENST00000417349 (TAF6-013)
|
100113882-100119348 | protein_coding | ||
|
ENST00000421980 (TAF6-003)
|
100107070-100119359 | nonsense_mediated_decay | ||
|
ENST00000431404 (TAF6-018)
|
100114169-100119304 | protein_coding | ||
|
ENST00000437822 (TAF6-002)
|
100107168-100119841 | protein_coding | ||
|
ENST00000440225 (TAF6-010)
|
100111965-100119317 | protein_coding | ||
|
ENST00000449571 (TAF6-008)
|
100113401-100119567 | protein_coding | ||
|
ENST00000451699 (TAF6-009)
|
100113670-100119372 | protein_coding | ||
|
ENST00000452041 (TAF6-007)
|
100107078-100119364 | protein_coding | ||
|
ENST00000452438 (TAF6-014)
|
100112847-100119364 | protein_coding | ||
|
ENST00000453269 (TAF6-004)
|
100107070-100119398 | protein_coding | ||
|
ENST00000460673 (TAF6-012)
|
100114182-100119356 | protein_coding | ||
|
ENST00000472509 (TAF6-016)
|
100107078-100114558 | protein_coding | ||
|
ENST00000487115 (TAF6-006)
|
100110077-100111324 | retained_intron | ||
|
ENST00000487288 (TAF6-015)
|
100111799-100118976 | retained_intron | ||
|
ENST00000493322 (TAF6-017)
|
100111954-100119349 | protein_coding | ||
|
ENST00000497233 (TAF6-011)
|
100114229-100119366 | processed_transcript | ||
|
ENST00000520135 (TAF6-020)
|
100113642-100119349 | protein_coding | ||
|
ENST00000523306 (TAF6-019)
|
100113349-100119339 | protein_coding | ||
|
ENSG00000166508 (MCM7) minichromosome maintenance complex component 7 |
ENST00000303887 (MCM7-001)
|
100092781-100101940 | protein_coding | |
|
ENST00000343023 (MCM7-003)
|
100092780-100101940 | protein_coding | ||
|
ENST00000354230 (MCM7-201)
|
100092729-100100780 | protein_coding | ||
|
ENST00000425308 (MCM7-009)
|
100098140-100100869 | protein_coding | ||
|
ENST00000463722 (MCM7-007)
|
100098059-100101409 | retained_intron | ||
|
ENST00000465688 (MCM7-015)
|
100099464-100101310 | retained_intron | ||
|
ENST00000465738 (MCM7-011)
|
100099686-100100393 | retained_intron | ||
|
ENST00000467516 (MCM7-016)
|
100099319-100100473 | retained_intron | ||
|
ENST00000477372 (MCM7-010)
|
100097613-100099345 | retained_intron | ||
|
ENST00000485286 (MCM7-006)
|
100092781-100100757 | retained_intron | ||
|
ENST00000489841 (MCM7-002)
|
100092728-100101370 | retained_intron | ||
|
ENST00000491245 (MCM7-005)
|
100093292-100099737 | nonsense_mediated_decay | ||
|
ENST00000493352 (MCM7-014)
|
100093316-100095664 | retained_intron | ||
|
ENST00000621318 (MCM7-202)
|
100092729-100101940 | protein_coding | ||
|
ENSG00000207547 (MIR25) microRNA 25 |
ENST00000384816 (MIR25-201)
|
100093560-100093643 | miRNA | |
|
ENSG00000207757 (MIR93) microRNA 93 |
ENST00000385024 (MIR93-201)
|
100093768-100093847 | miRNA | |
|
ENSG00000208036 (MIR106B) microRNA 106b |
ENST00000385301 (MIR106B-201)
|
100093993-100094074 | miRNA | |
| CIL_0003DY_0002 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSMUSG00000029730-ENSMUSG00000019518 | CGP | 10090 | 5:138164583-138178708 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSMUSG00000019494 (Cops6) COP9 (constitutive photomorphogenic) homolog, subunit 6 (Arabidopsis thaliana) |
ENSMUST00000019638 (Cops6-001)
|
138161071-138164646 | protein_coding | |
|
ENSMUST00000110951 (Cops6-002)
|
138161100-138163978 | protein_coding | ||
|
ENSMUST00000127881 (Cops6-004)
|
138161109-138162384 | retained_intron | ||
|
ENSMUST00000132639 (Cops6-005)
|
138162777-138163919 | protein_coding | ||
|
ENSMUST00000154867 (Cops6-003)
|
138161169-138164139 | retained_intron | ||
|
ENSMUSG00000019518 (Ap4m1) adaptor-related protein complex AP-4, mu 1 |
ENSMUST00000019662 (Ap4m1-001)
|
138172002-138178708 | protein_coding | |
|
ENSMUST00000134100 (Ap4m1-007)
|
138176569-138178687 | retained_intron | ||
|
ENSMUST00000142687 (Ap4m1-006)
|
138174786-138177200 | retained_intron | ||
|
ENSMUST00000143241 (Ap4m1-002)
|
138172068-138178681 | nonsense_mediated_decay | ||
|
ENSMUST00000151318 (Ap4m1-004)
|
138172005-138175013 | protein_coding | ||
|
ENSMUST00000155745 (Ap4m1-005)
|
138172582-138174944 | retained_intron | ||
|
ENSMUST00000157031 (Ap4m1-003)
|
138172047-138174372 | retained_intron | ||
|
ENSMUSG00000029730 (Mcm7) minichromosome maintenance deficient 7 (S. cerevisiae) |
ENSMUST00000000505 (Mcm7-001)
|
138164583-138172422 | protein_coding | |
|
ENSMUST00000125316 (Mcm7-010)
|
138164600-138165716 | retained_intron | ||
|
ENSMUST00000139223 (Mcm7-009)
|
138168709-138169643 | processed_transcript | ||
|
ENSMUST00000139983 (Mcm7-006)
|
138168878-138171017 | protein_coding | ||
|
ENSMUST00000142254 (Mcm7-008)
|
138168060-138170381 | retained_intron | ||
|
ENSMUST00000147920 (Mcm7-005)
|
138169411-138171241 | protein_coding | ||
|
ENSMUST00000148094 (Mcm7-007)
|
138169209-138170661 | protein_coding | ||
|
ENSMUST00000148879 (Mcm7-002)
|
138164600-138171818 | protein_coding | ||
|
ENSMUST00000153867 (Mcm7-004)
|
138168456-138171266 | protein_coding | ||
|
ENSMUST00000155902 (Mcm7-003)
|
138168879-138171815 | protein_coding | ||
|
ENSMUSG00000036980 (Taf6) TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor |
ENSMUST00000048698 (Taf6-002)
|
138178617-138187226 | protein_coding | |
|
ENSMUST00000110936 (Taf6-001)
|
138178617-138187451 | protein_coding | ||
|
ENSMUST00000110937 (Taf6-005)
|
138178620-138187205 | protein_coding | ||
|
ENSMUST00000123415 (Taf6-003)
|
138182675-138187226 | protein_coding | ||
|
ENSMUST00000130473 (Taf6-006)
|
138180148-138181468 | retained_intron | ||
|
ENSMUST00000139276 (Taf6-007)
|
138183917-138187215 | protein_coding | ||
|
ENSMUST00000153117 (Taf6-004)
|
138178628-138187221 | nonsense_mediated_decay | ||
|
ENSMUSG00000065514 (Mir106b) microRNA 106b |
ENSMUST00000083580 (Mir106b-201)
|
138165737-138165818 | miRNA | |
Expression Patterns
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