C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: adaptor-related protein complex AP-4, mu 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000143241 Ap4m1-002 ENSMUSG00000019518 10090 + 5:138172068-138178681 nonsense_mediated_decay

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008QI CIL_0008QI_0002 VISTA 5:137705744-138314172
CIL_0003E2 CIL_0003E2_0002 CGP 5:138161071-138172422
CIL_0003DY CIL_0003DY_0002 CGP 5:138164583-138178708
CIL_0005LK CIL_0005LK_0002 CGP 5:138172002-138187451

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005802 TAS trans-Golgi network
GO:0006886 TAS intracellular protein transport
GO:0016192 TAS vesicle-mediated transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000303887 MCM7-001 protein_coding Homo_sapiens 4e-16 92
ENST00000343023 MCM7-003 protein_coding Homo_sapiens 3e-16 92
ENST00000359593 AP4M1-001 protein_coding Homo_sapiens 0 1103
ENST00000394061 AP4M1-009 nonsense_mediated_decay Homo_sapiens 0 270
ENST00000416938 AP4M1-017 nonsense_mediated_decay Homo_sapiens 0 340
ENST00000421755 AP4M1-015 protein_coding Homo_sapiens 0 1103
ENST00000422582 AP4M1-008 protein_coding Homo_sapiens 0 1103
ENST00000429084 AP4M1-006 protein_coding Homo_sapiens 0 1103
ENST00000438383 AP4M1-002 protein_coding Homo_sapiens 0 944
ENST00000439416 AP4M1-010 protein_coding Homo_sapiens 0 708
ENST00000445208 AP4M1-003 nonsense_mediated_decay Homo_sapiens 0 1469
ENST00000446007 AP4M1-004 nonsense_mediated_decay Homo_sapiens 0 351
ENST00000463195 AP4M1-007 retained_intron Homo_sapiens 0 340
ENST00000478501 AP4M1-011 processed_transcript Homo_sapiens 0 267
ENST00000621318 MCM7-202 protein_coding Homo_sapiens 4e-16 92

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