C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: REV3-like, catalytic subunit of DNA polymerase zeta RAD54 like (S. cerevisiae)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000019841 Rev3l 10090 + 10:39732118-39875211 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000019986 Rev3l-001 39732118-39875211 protein_coding
  ENSMUST00000123103 Rev3l-005 39858925-39862970 retained_intron
  ENSMUST00000127726 Rev3l-006 39867109-39874488 retained_intron
  ENSMUST00000131186 Rev3l-002 39732127-39875168 nonsense_mediated_decay
  ENSMUST00000139803 Rev3l-004 39825131-39875208 nonsense_mediated_decay
  ENSMUST00000145333 Rev3l-003 39828274-39842823 retained_intron
  ENSMUST00000164763 Rev3l-201 39732364-39875206 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000019986ENSMUST00000127726ENSMUST00000131186ENSMUST00000139803ENSMUST00000164763
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000019986 4.065±3.45 0.533±0.05 1.113±0.17 4.671±1.29 1.640±0.47 1.065±0.29 0.321±0.11 0.491±0.16 0.465±0.11 1.439±0.52 0.684±0.00 3.049±1.12 0.801±0.25 1.937±0.13
ENSMUST00000127726 3.832±0.07 N/A N/A 36.650±0.00 6.946±1.04 N/A N/A 2.620±0.07 4.939±2.58 N/A N/A 8.389±0.00 N/A N/A
ENSMUST00000131186 3.155±0.00 1.794±0.00 N/A N/A 0.978±0.48 0.704±0.21 0.131±0.01 0.409±0.19 0.417±0.17 0.795±0.16 N/A 0.989±0.23 0.486±0.00 2.300±0.34
ENSMUST00000139803 7.317±6.07 N/A 8.231±1.91 12.939±8.64 2.955±0.85 1.313±0.44 0.670±0.20 1.073±0.38 1.766±1.13 1.599±0.45 3.657±1.07 3.227±1.45 2.021±0.74 4.411±0.23
ENSMUST00000164763 2.514±1.29 1.282±0.19 1.698±0.00 3.597±1.49 1.291±0.36 0.704±0.05 0.456±0.20 0.339±0.13 0.645±0.33 1.382±0.19 0.938±0.25 4.284±1.11 0.982±0.58 2.567±0.50

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000954 CIL_000954_0002 VISTA 10:39357714-39964005

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003677 IEA DNA binding
GO:0003887 IBA DNA-directed DNA polymerase activity
GO:0005515 IEA protein binding
GO:0005634 IBA nucleus
GO:0005694 IBA chromosome
GO:0005730 IDA nucleolus
GO:0006260 IEA DNA replication
GO:0006281 IMP DNA repair
GO:0016035 ISS zeta DNA polymerase complex
GO:0019985 IBA translesion synthesis
GO:0046872 IEA metal ion binding
GO:0051539 IEA 4 iron, 4 sulfur cluster binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000058801 rev3l REV3-like, catalytic subunit of DNA polymerase zeta (yeast) protein_coding Danio_rerio
ENSG00000009413 REV3L REV3-like, polymerase (DNA directed), zeta, catalytic subunit protein_coding Homo_sapiens

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