C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ATPase, Ca++ transporting, plasma membrane 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000019943 Atp2b1 10090 + 10:98915152-99026143 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000020107 Atp2b1-201 98915152-99026143 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000020107
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000020107 7.327±3.88 3.761±1.20 12.755±0.70 12.067±1.91 5.654±0.84 16.967±2.87 1.794±0.71 3.407±1.04 2.596±1.47 10.360±0.60 7.122±0.78 5.184±1.44 9.232±2.64 1.159±0.23

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008GQ CIL_0008GQ_0002 VISTA 10:98383082-98985589

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005388 IEA calcium-transporting ATPase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005887 TAS integral component of plasma membrane
GO:0006816 TAS calcium ion transport
GO:0008152 IEA metabolic process
GO:0046872 IEA metal ion binding
GO:0070062 IEA extracellular vesicular exosome
GO:0070588 IEA calcium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000007788 atp2b1b ATPase, Ca++ transporting, plasma membrane 1b protein_coding Danio_rerio
ENSDARG00000012684 atp2b1a ATPase, Ca++ transporting, plasma membrane 1a protein_coding Danio_rerio
ENSG00000070961 ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 protein_coding Homo_sapiens

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