C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008GQ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
mm696 VISTA 9606 12:89648751-90251418
GeneTranscriptPositionBiotype
ENSG00000070961 (ATP2B1)
ATPase, Ca++ transporting, plasma membrane 1 		ENST00000261173 (ATP2B1-201) 89588051-89656067 protein_coding
ENST00000359142 (ATP2B1-002) 89588049-89656111 protein_coding
ENST00000393164 (ATP2B1-003) 89590842-89630754 protein_coding
ENST00000428670 (ATP2B1-001) 89588072-89708831 protein_coding
ENST00000549585 (ATP2B1-006) 89641823-89656019 retained_intron
ENST00000549727 (ATP2B1-007) 89603838-89612147 retained_intron
ENST00000550716 (ATP2B1-004) 89591103-89603152 protein_coding
ENST00000551009 (ATP2B1-008) 89603796-89610705 retained_intron
ENST00000551310 (ATP2B1-005) 89655583-89709300 protein_coding
ENST00000552275 (ATP2B1-009) 89601404-89603766 retained_intron
ENSG00000257194 (RP11-567C2.1)
 ENST00000548722 (RP11-567C2.1-001) 90107739-90112779 lincRNA
ENSG00000257480 (MRPL2P1)
mitochondrial ribosomal protein L2 pseudogene 1 		ENST00000546688 (MRPL2P1-001) 89752913-89753831 processed_pseudogene
ENSG00000257725 (RP11-654D12.3)
 ENST00000547094 (RP11-654D12.3-001) 89947693-89949726 lincRNA
ENSG00000258216 (RP11-654D12.2)
 ENST00000547370 (RP11-654D12.2-002) 89882665-89937143 lincRNA
ENST00000549551 (RP11-654D12.2-001) 89919692-89989289 lincRNA
ENSG00000258290 (RP11-654D12.1)
 ENST00000546823 (RP11-654D12.1-001) 89919437-89919776 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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CIL_0008GQ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
mm696 VISTA 10090 10:98383082-98985589
GeneTranscriptPositionBiotype
ENSMUSG00000019943 (Atp2b1)
ATPase, Ca++ transporting, plasma membrane 1 		ENSMUST00000020107 (Atp2b1-201) 98915152-99026143 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008GQ_0001ENSG00000070961ENST00000261173ENST00000359142ENST00000393164ENST00000428670ENST00000549585ENST00000549727ENST00000550716ENST00000551009ENST00000551310ENST00000552275ENSG00000257194ENST00000548722ENSG00000257480ENST00000546688ENSG00000257725ENST00000547094ENSG00000258216ENST00000547370ENST00000549551ENSG00000258290ENST00000546823CIL_0008GQ_0002ENSMUSG00000019943ENSMUST00000020107
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008GQ_0001ENSG00000070961ENST00000261173ENST00000359142ENST00000393164ENST00000428670ENSG00000257194ENST00000548722ENSG00000257480ENST00000546688ENSG00000257725ENST00000547094ENSG00000258216ENST00000547370ENST00000549551ENSG00000258290ENST00000546823CIL_0008GQ_0002ENSMUSG00000019943ENSMUST00000020107
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000070961 ENST00000261173 2.426±0.00 1.398±0.00 2.333±0.00 N/A 1.090±0.34 7.373±0.00 0.565±0.00 2.107±0.95 2.792±2.27 5.459±2.73 1.476±0.00 2.073±0.63 4.616±3.98 6.121±1.24
ENST00000359142 N/A 1.487±0.00 N/A 29.326±15.49 N/A N/A 0.647±0.00 N/A N/A N/A 1.758±0.00 N/A N/A N/A
ENST00000393164 1.519±0.00 N/A N/A N/A 1.465±0.00 N/A 0.750±0.00 N/A N/A N/A 1.136±0.75 1.794±0.45 3.708±0.00 2.313±0.00
ENST00000428670 N/A 1.885±0.00 0.656±0.00 N/A 3.907±0.00 2.877±0.00 0.369±0.00 1.772±0.00 1.207±0.00 0.972±0.00 1.254±0.00 2.485±0.00 2.956±0.91 2.628±0.15
ENST00000549585 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000549727 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000550716 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000551009 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000551310 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000552275 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000257194 ENST00000548722 N/A N/A N/A 0.064±0.00 0.036±0.00 N/A 0.204±0.00 0.049±0.00 N/A N/A N/A N/A 0.042±0.00 0.237±0.15
ENSG00000257480 ENST00000546688 N/A 0.038±0.00 0.236±0.00 0.080±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000257725 ENST00000547094 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.419±0.32
ENSG00000258216 ENST00000547370 N/A 0.081±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.138±0.00
ENST00000549551 N/A 0.303±0.00 N/A 3.075±0.00 0.216±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 1.221±0.00
ENSG00000258290 ENST00000546823 N/A N/A N/A 0.056±0.00 N/A N/A 0.048±0.00 N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000019943 ENSMUST00000020107 7.327±3.88 3.761±1.20 12.755±0.70 12.067±1.91 5.654±0.84 16.967±2.87 1.794±0.71 3.407±1.04 2.596±1.47 10.360±0.60 7.122±0.78 5.184±1.44 9.232±2.64 1.159±0.23

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