C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: POC1 centriolar protein homolog B (Chlamydomonas)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000019952 Poc1b 10090 + 10:99107036-99198074 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000020113 Poc1b-001 99107036-99197988 protein_coding
  ENSMUST00000159043 Poc1b-004 99129487-99192789 nonsense_mediated_decay
  ENSMUST00000159228 Poc1b-002 99107082-99197052 protein_coding
  ENSMUST00000159990 Poc1b-003 99107103-99198074 protein_coding
  ENSMUST00000162704 Poc1b-005 99171284-99197028 processed_transcript
  ENSMUST00000162847 Poc1b-006 99192892-99196850 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000020113ENSMUST00000159043ENSMUST00000159228ENSMUST00000159990ENSMUST00000162704
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000020113 0.677±0.29 N/A 2.832±0.39 2.902±1.99 1.633±1.01 2.143±0.52 1.026±0.37 1.349±0.49 2.212±1.42 1.531±0.81 0.340±0.16 2.237±0.78 1.826±0.55 9.052±4.21
ENSMUST00000159043 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.507±1.05 8.152±0.00
ENSMUST00000159228 N/A 0.902±0.14 N/A N/A N/A N/A N/A 0.666±0.00 0.457±0.00 N/A 0.242±0.04 1.186±0.00 0.857±0.36 12.909±5.46
ENSMUST00000159990 1.699±0.07 2.580±0.58 2.871±0.93 4.290±0.23 1.859±0.46 3.015±1.50 0.850±0.05 1.212±0.53 1.239±0.32 1.588±0.50 0.695±0.16 1.803±0.78 0.825±0.28 10.018±0.48
ENSMUST00000162704 N/A N/A N/A 4.182±2.70 N/A N/A N/A N/A 4.756±0.73 N/A N/A 4.019±0.08 1.194±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002EZ CIL_0002EZ_0002 CGP 10:99107036-99198074

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000922 ISS spindle pole
GO:0003674 ND molecular_function
GO:0005813 IEA centrosome
GO:0005814 ISS centriole
GO:0008283 ISS cell proliferation
GO:0036064 ISS ciliary basal body
GO:0042384 ISS cilium assembly

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000021110 poc1b POC1 centriolar protein homolog B (Chlamydomonas) protein_coding Danio_rerio
ENSG00000139323 POC1B POC1 centriolar protein B protein_coding Homo_sapiens

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