C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: POC1 centriolar protein homolog B (Chlamydomonas)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000020113 Poc1b-001 ENSMUSG00000019952 10090 + 10:99107036-99197988 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000020113
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000020113 0.677±0.29 2.832±0.39 2.902±1.99 1.633±1.01 2.143±0.52 1.026±0.37 1.349±0.49 2.212±1.42 1.531±0.81 0.340±0.16 2.237±0.78 1.826±0.55 9.052±4.21

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002EZ CIL_0002EZ_0002 CGP 10:99107036-99198074

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000922 ISS spindle pole
GO:0003674 ND molecular_function
GO:0005813 IEA centrosome
GO:0005814 ISS centriole
GO:0008283 ISS cell proliferation
GO:0036064 ISS ciliary basal body
GO:0042384 ISS cilium assembly

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000313546 POC1B-001 protein_coding Homo_sapiens 0 1210
ENST00000393179 POC1B-007 protein_coding Homo_sapiens 0 937
ENST00000539190 POC1B-006 retained_intron Homo_sapiens 0 922
ENST00000547474 POC1B-GALNT4-002 protein_coding Homo_sapiens 9.99995e-41 172
ENST00000547496 POC1B-002 nonsense_mediated_decay Homo_sapiens 0 845
ENST00000548729 POC1B-GALNT4-001 protein_coding Homo_sapiens 3e-40 172
ENST00000549035 POC1B-005 protein_coding Homo_sapiens 0 1199
ENST00000549304 POC1B-014 processed_transcript Homo_sapiens 0 468

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